PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18009.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

E2F/DP

Protein Properties

Length: 351aa MW: 38990.5 Da PI: 8.6326

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.2	5e-27	96	179	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k +++k+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k + +ei+wkg OVA18009.1 96 TGRGLRQFSMK---VCQKVESkGRTTYNEVADELVAEfsdpsssattpdqqqyDEKNIRRRVYDALNVLMAMDIISKDKNREIQWKG 179 689******...*999***************************************************9999**98 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MVIRGSNQEN GQKKQPESFS RGGFSSVSGG QSISTSGSVG SPSSRIEHPM STPVSEKTLS 60 RFDHLDIQGE DVGSRSAVTG KKKKRVQQRA VGGDKTGRGL RQFSMKVCQK VESKGRTTYN 120 EVADELVAEF SDPSSSATTP DQQQYDEKNI RRRVYDALNV LMAMDIISKD KNREIQWKGL 180 PRTGPNDIEE LKAERLGLRT RNEKKAAYLQ ELEEQFVGLQ NLIQRNEQLY SSGNAPSGGV 240 PLPFILVQTR PHATVEVEIS EDMQLVHFDF NTTPFELHDD NYVLKAMRFC ERSKNDSTQE 300 SAANGGEGSQ GNEIMYHPPI PHPVKSNTTG RPPTSPPFPG ILKSRAKHEQ M

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MVIRGSNQEN GQKKQPESFS RGGFSSVSGG QSISTSGSVG SPSSRIEHPM STPVSEKTLS  60
RFDHLDIQGE DVGSRSAVTG KKKKRVQQRA VGGDKTGRGL RQFSMKVCQK VESKGRTTYN  120
EVADELVAEF SDPSSSATTP DQQQYDEKNI RRRVYDALNV LMAMDIISKD KNREIQWKGL  180
PRTGPNDIEE LKAERLGLRT RNEKKAAYLQ ELEEQFVGLQ NLIQRNEQLY SSGNAPSGGV  240
PLPFILVQTR PHATVEVEIS EDMQLVHFDF NTTPFELHDD NYVLKAMRFC ERSKNDSTQE  300
SAANGGEGSQ GNEIMYHPPI PHPVKSNTTG RPPTSPPFPG ILKSRAKHEQ M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-136	E2F/DP family protein