PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17959.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 314aa MW: 33409.9 Da PI: 8.0719

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H OVA17959.1 132 YECKTCNRCFPSFQALGGHRASH 154 99**********99999998887 PP
2	zf-C2H2	13.6	0.0002	210	232	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H OVA17959.1 210 HECSICGSEFSSGQALGGHMRRH 232 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MMGSNDLTYI AKGKRTKRQR PQSPIFLAMT TSSSNSGPGG GSGGGGGGGG TGGGYDQNSF 60 SPTSSTTGFT ESTEEEEDMA NCLILLAKGG HSRDENSKRI EEIGTGNVER FNSRRFTEAS 120 ATTTGKGGFY VYECKTCNRC FPSFQALGGH RASHKKPKNM AAEDQKIKPL PPLVLSSEDE 180 AQLLPIQISS NIRTSSIGGN TINNNKSKVH ECSICGSEFS SGQALGGHMR RHRTTSTSTS 240 TSTTTAAATT IINNPVTVMS DESDHQEPKQ KSRNLLSLDL NLPAPSEDDR EGKFSFGSKQ 300 SLVFSASALV DCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	1e-55	C2H2 family protein