PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA17883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 225aa MW: 25968.1 Da PI: 6.5319 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.3 | 2.3e-17 | 67 | 118 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +qle Le+ F+++ ++ e++ +LA++lgL+ r+V vWFqNrRa++k OVA17883.1 67 RRMRWDQLESLERSFQEEIKLEPERKIRLAQELGLQPRKVAVWFQNRRARWK 118 456779*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 110.2 | 1.4e-35 | 64 | 155 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 e+krr+ +q+++LE+sF+ee kLeperK +la+eLglqpr+vavWFqnrRAR+k+kqlE+ y+aLk+++d +++e+ +L++ev +L+++l+ OVA17883.1 64 ERKRRMRWDQLESLERSFQEEIKLEPERKIRLAQELGLQPRKVAVWFQNRRARWKAKQLERLYDALKQEFDVVSREKLKLQEEVMKLKAKLD 155 69**************************************************************************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 225 aa Download sequence |
MAWNDKLRPL MASGAGGEHT VTFLYDYNFH HLPERHQVIE GERPPPINNN SNSSSSSNNN 60 NNQERKRRMR WDQLESLERS FQEEIKLEPE RKIRLAQELG LQPRKVAVWF QNRRARWKAK 120 QLERLYDALK QEFDVVSREK LKLQEEVMKL KAKLDDQAVA IQGSKGCTEA SAEIDETDES 180 KSVVINSSTM LQGAIADCNY VFNVDDYNTG SLPYLGILPG YPYTY |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 113 | 121 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03790.1 | 1e-45 | HD-ZIP family protein |