PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17468.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 436aa MW: 48432.7 Da PI: 8.3939

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.2	7.3e-41	107	183	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCevhsk+p+v+v g+eqrfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+ OVA17468.1 107 CLVDGCDSDLSKCRDYHRRHKVCEVHSKTPKVMVGGQEQRFCQQCSRFHSLLEFDEVKRSCRKRLDGHNRRRRKSQP 183 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MIKRGKGEEE EKGKGFMDWD WKPASWDFSG LERESNSNIA PIVRSSSLGG EQSKKDCSVD 60 LKLGRLGDLG SGSVDRWQDP RVTMVSSPLG SSKKARAPSN ETQTVSCLVD GCDSDLSKCR 120 DYHRRHKVCE VHSKTPKVMV GGQEQRFCQQ CSRFHSLLEF DEVKRSCRKR LDGHNRRRRK 180 SQPESLSMNS GSLLSNHQGT RYLQFTSPQL FQSTMVGSPR HVMKTKDDTE LYSRHQSLHL 240 VDGQNPFPRS FSCNFKGGKQ YPFLHGDDPG LGNPPTVPEV SFCQPLVHSV ASSSQSSEAS 300 RKMLSDGFTN RVVIDSDCAL SLLSSPPSRQ SSGISQADMV HTNSIPMAHP LVGGLQYDGL 360 LEVCDVINMY NSPWLQCQMT LMHALPLALV FGAWPVPNWP DVCCPEKGPA KSSLSHTHSS 420 SWAGLSLNRN LYDLRM

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MIKRGKGEEE EKGKGFMDWD WKPASWDFSG LERESNSNIA PIVRSSSLGG EQSKKDCSVD  60
LKLGRLGDLG SGSVDRWQDP RVTMVSSPLG SSKKARAPSN ETQTVSCLVD GCDSDLSKCR  120
DYHRRHKVCE VHSKTPKVMV GGQEQRFCQQ CSRFHSLLEF DEVKRSCRKR LDGHNRRRRK  180
SQPESLSMNS GSLLSNHQGT RYLQFTSPQL FQSTMVGSPR HVMKTKDDTE LYSRHQSLHL  240
VDGQNPFPRS FSCNFKGGKQ YPFLHGDDPG LGNPPTVPEV SFCQPLVHSV ASSSQSSEAS  300
RKMLSDGFTN RVVIDSDCAL SLLSSPPSRQ SSGISQADMV HTNSIPMAHP LVGGLQYDGL  360
LEVCDVINMY NSPWLQCQMT LMHALPLALV FGAWPVPNWP DVCCPEKGPA KSSLSHTHSS  420
SWAGLSLNRN LYDLRM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	1e-52	SBP family protein