PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA17379.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 483aa MW: 53337.8 Da PI: 4.6102

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA17379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.7e-12	301	343	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N++++ Lr+++Pk + K++ a+iL A++Y+k+L OVA17379.1 301 MAERRRRKKLNDRLFMLRSVVPKiS------KMDRASILGDAIDYLKEL 343 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MLSRVNNGVS WMGEEGDEEP IPWTRNNEGG ETNKDDLVSL SSFKLMLEDD WYTNQLQINP 60 NPSLNDFQTI QNNQEIKDIT FSSLLNVICS NPFDNSFDLG YNPEFLAPLE TNQTSISPVL 120 MNDGGEVLTG FSNSSSQNQM GTPNLSSNTQ FSSTHLMSLP ENGGNGFNQT SFEGSGNSLF 180 LKPLEILPPV GAPPTLFQKR FASVLQNLAT MDREGNLGFL SSDNGQSSAM VEGIERKMEL 240 GDEQEKSIDG SGLNYDSDEG TDNNMVEENT KKCGNNLNAN SNVTGGDQKG KKKGLPAKNL 300 MAERRRRKKL NDRLFMLRSV VPKISKMDRA SILGDAIDYL KELLQRINDL HNELESNPPG 360 SSQPTSFHPL TLTPPTLPYR VKEELCPSSL PSPNGQPTRV EVRVREGRAV NIHMFCARRP 420 GLLFSTMRAL DDLGLDIEQA VISCFDGFSL DVFRAEQRKE GVDVLPEHIK AILLNSAGIH 480 GMM

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MLSRVNNGVS WMGEEGDEEP IPWTRNNEGG ETNKDDLVSL SSFKLMLEDD WYTNQLQINP  60
NPSLNDFQTI QNNQEIKDIT FSSLLNVICS NPFDNSFDLG YNPEFLAPLE TNQTSISPVL  120
MNDGGEVLTG FSNSSSQNQM GTPNLSSNTQ FSSTHLMSLP ENGGNGFNQT SFEGSGNSLF  180
LKPLEILPPV GAPPTLFQKR FASVLQNLAT MDREGNLGFL SSDNGQSSAM VEGIERKMEL  240
GDEQEKSIDG SGLNYDSDEG TDNNMVEENT KKCGNNLNAN SNVTGGDQKG KKKGLPAKNL  300
MAERRRRKKL NDRLFMLRSV VPKISKMDRA SILGDAIDYL KELLQRINDL HNELESNPPG  360
SSQPTSFHPL TLTPPTLPYR VKEELCPSSL PSPNGQPTRV EVRVREGRAV NIHMFCARRP  420
GLLFSTMRAL DDLGLDIEQA VISCFDGFSL DVFRAEQRKE GVDVLPEHIK AILLNSAGIH  480
GMM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	309	KKKGLPAKNLMAERRRRKK
2	303	310	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-109	bHLH family protein