PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16667.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 1036aa MW: 114867 Da PI: 6.0037

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	122.1	2.5e-38	144	222	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS.SEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs.rfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C +dls ak yhrrhkvCe+hska++ lv ++ qrfCqqCs rfh l+efDe+krsCrrrLa+hn+rrrk+q OVA16667.1 144 VCQVEDCGVDLSIAKPYHRRHKVCEMHSKASQSLVGNVLQRFCQQCSsRFHLLQEFDEGKRSCRRRLAGHNRRRRKPQR 222 6*******************************************55**************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1036 aa Download sequence
METRFVLKEK DLMGFGKKSL EWDLNDWKWD GDLFLASSLN SVPINSREFL PVRPEIPVTG 60 GGSSNSSSSC SDEINLKGKK ELEKRRRVVI VEDDDDLIDE AENLTLKLGE HVYPITEGDG 120 GSGKKLKLLE TTTATTTTTT NRAVCQVEDC GVDLSIAKPY HRRHKVCEMH SKASQSLVGN 180 VLQRFCQQCS SRFHLLQEFD EGKRSCRRRL AGHNRRRRKP QREAVFNGSS LNDEEARGYL 240 LITLLRILSN LHSNNSDQTK DEVILSHLLR NLASLADTFG EKNTSGLQQG SQDMLNAGTL 300 AGTSLKIAET LLSIGSEPSK FLGSTSRING GDGAQDVHMR PTNQSVNVVA SKIPQVVTTT 360 HGAWGGSLQT VSPNATTSLP MGDSVPAKAE VPDSTAGRIK LNDFDLNSIY IDSQDCIEGL 420 KRSETPLNLV TNSLDCPSWV QQHSHQSSPP QTSGNSDSAS DQSPSSSSGD AQSRTDRIVF 480 KLFGKDPHDF PLVLRSQILD WLSHSPTDIE SYIRPGCIML TIYLRLTESM WEELHSDLSS 540 SLSRLLDVSD DPFWRRGWVY ARVQHRIAFI FQGQVVLDMP LPRKEHNDCK ISSITPLALS 600 VSESTQFIVK GFNLFRPTTR LLCALDGKYL VQEVVSDLVE GSDTFEEDDE LQCLSFTCSV 660 PDVTGRGFIE VDDNGLSSSS FPFIVAEQDV CSEICTLEGA IEASESDADD DGRTSGRMGA 720 KDQALNFIHE MGWLLHRSSL RSKLGKMDPN TDAFTFTRFR GLMEFAMDHD WCAVVKKLLD 780 ILFEGTVDAG GHTSIELQLS EMGLLHRAVR RSCRLMVELL LRYVPDKASE NVRPGQKQLA 840 DRGSDSFMFR SDDVGPADLT PLHIAASRIG SESVLDALTD DPGSVGVVAW KSALDKTGLT 900 PEDYARMRGH YSYIHLVQKK INNKSEAGHV ILDIPRTISE SNNQKQKNEL LDSAKVSGFQ 960 VEKKAELRPI RQSCKLCDQK LVYRNRRSFL GYRPTVLSLV SIAAVCVCLG LLFKSSPEVL 1020 CILSPFRWEL LDFGTM

Sequence ? help Back to Top

Protein Sequence Length: 1036 aa Download sequence

METRFVLKEK DLMGFGKKSL EWDLNDWKWD GDLFLASSLN SVPINSREFL PVRPEIPVTG  60
GGSSNSSSSC SDEINLKGKK ELEKRRRVVI VEDDDDLIDE AENLTLKLGE HVYPITEGDG  120
GSGKKLKLLE TTTATTTTTT NRAVCQVEDC GVDLSIAKPY HRRHKVCEMH SKASQSLVGN  180
VLQRFCQQCS SRFHLLQEFD EGKRSCRRRL AGHNRRRRKP QREAVFNGSS LNDEEARGYL  240
LITLLRILSN LHSNNSDQTK DEVILSHLLR NLASLADTFG EKNTSGLQQG SQDMLNAGTL  300
AGTSLKIAET LLSIGSEPSK FLGSTSRING GDGAQDVHMR PTNQSVNVVA SKIPQVVTTT  360
HGAWGGSLQT VSPNATTSLP MGDSVPAKAE VPDSTAGRIK LNDFDLNSIY IDSQDCIEGL  420
KRSETPLNLV TNSLDCPSWV QQHSHQSSPP QTSGNSDSAS DQSPSSSSGD AQSRTDRIVF  480
KLFGKDPHDF PLVLRSQILD WLSHSPTDIE SYIRPGCIML TIYLRLTESM WEELHSDLSS  540
SLSRLLDVSD DPFWRRGWVY ARVQHRIAFI FQGQVVLDMP LPRKEHNDCK ISSITPLALS  600
VSESTQFIVK GFNLFRPTTR LLCALDGKYL VQEVVSDLVE GSDTFEEDDE LQCLSFTCSV  660
PDVTGRGFIE VDDNGLSSSS FPFIVAEQDV CSEICTLEGA IEASESDADD DGRTSGRMGA  720
KDQALNFIHE MGWLLHRSSL RSKLGKMDPN TDAFTFTRFR GLMEFAMDHD WCAVVKKLLD  780
ILFEGTVDAG GHTSIELQLS EMGLLHRAVR RSCRLMVELL LRYVPDKASE NVRPGQKQLA  840
DRGSDSFMFR SDDVGPADLT PLHIAASRIG SESVLDALTD DPGSVGVVAW KSALDKTGLT  900
PEDYARMRGH YSYIHLVQKK INNKSEAGHV ILDIPRTISE SNNQKQKNEL LDSAKVSGFQ  960
VEKKAELRPI RQSCKLCDQK LVYRNRRSFL GYRPTVLSLV SIAAVCVCLG LLFKSSPEVL  1020
CILSPFRWEL LDFGTM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	88	KRRRV
2	203	220	KRSCRRRLAGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein