PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA16175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | FAR1 | ||||||||
Protein Properties | Length: 224aa MW: 25621.9 Da PI: 8.109 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87.1 | 2.6e-27 | 52 | 142 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+Y+k++GF++r+++ ++s++++ i+ r++vCskeg+r++++ +++ +r++tr gCka+++v ++ g+w vtk+ eHnH+l+ OVA16175.1 52 EFYNAYGKRMGFTIRTNRIRHSQKSRAIIARDYVCSKEGFRSTKHALrKDRILPPRPTTREGCKAMIRVAVKDGGQWIVTKFIGEHNHKLM 142 6*****************************************9998823334459**********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MASIDGQLDS CDSSTDLNNE IRVSTMQDLN ANPDPVEPYI GMSFKSVDDA REFYNAYGKR 60 MGFTIRTNRI RHSQKSRAII ARDYVCSKEG FRSTKHALRK DRILPPRPTT REGCKAMIRV 120 AVKDGGQWIV TKFIGEHNHK LMTRNKAPGE QFKASLLSEA EKDKKIEDLF NELQHEKQRT 180 AGFREQLYMV LSDIEEHAQH ISVRVQDVVN NVRELESSEE GGLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 9e-44 | FAR1 family protein |