PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16173.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 265aa    MW: 28472.7 Da    PI: 5.9796
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00036109131123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  OVA16173.1 109 FSCNYCQRKFFSSQALGGHQNAH 131
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MKPQIPDLEA DALSEAESDV SSQVASNIST QDTTDPPKPT TTTTSSCLTD LINHHTNPVS  60
ISLDLTLNFN IGDGKLGERK ESVGLSLSST SESSSEAARI ATSGVPRIFS CNYCQRKFFS  120
SQALGGHQNA HKRERTLAKR AMRMGIFSER YASLASLPLH GSACRSLGIQ AHSSIHQGIL  180
PSERPVEIRG GAKFDHGYLG LPVFMEDDEA ELYWPGSFRQ VTEGGVGGGH HQGFELVGTS  240
NLNFVTMAPP PETDSSSTPD LTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-44C2H2 family protein