PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA16163.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 25925.7 Da PI: 5.0754 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.3 | 1.2e-15 | 75 | 123 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ +g+Wv+eIr+p++ ++r++lg+f t+e+Aa a++ a+++l+g OVA16163.1 75 NYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPTPEMAAVAYDVAALALKG 123 69***9.55.6*********843...5***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MNENDPLANV RQGNSSPQPP VNIVLPPDPP PAQSSQPPNR HQLPITTMTT SSSSSSSAPS 60 GRSSNNQPTA GKHPNYRGIR CRSGKWVSEI REPRKTTRIW LGTFPTPEMA AVAYDVAALA 120 LKGMDVVLNF PNSVSSYPIP ASSSPADIRA AATAAAASRL LKQQTDDHHH EDIKNDILAD 180 DTSKGGGETS KGEFIDEEAI FDMPKLLVNM AEGMLVSPPR INSPPSDDSP ENSDGESLWS 240 YS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-32 | ERF family protein |