PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA15871.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 496aa MW: 55758.8 Da PI: 8.2077

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA15871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.6e-17	148	197	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OVA15871.1 148 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 197 78*****************......55**********************997 PP
2	AP2	42.9	1.2e-13	240	290	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g OVA15871.1 240 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 290 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MLDLNDSPSG RKEKQSEGCS SQKTSVDGEE KGKGVGSFSN SSSSALVVSE EEESGGRKNK 60 SSMIFGFSVT HEDNCSSENE PVVTRQFFPM EESEMAGTAM GGFTPSFPRA QWVGVKFCQS 120 EPVGSAKPME VISQPMKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT 180 AHSAARAYDR AAIKFRGVEA DINFSLNDYE DDLKQMSNLT KEEFVHVLRR QSTGFPRGSS 240 KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDTEVEAARA YDKAAIKCNG KEAVTNFDPS 300 IYEDELNPGT GNNKDHNLDL CLGNSTSKHD HVDQSKDDNR FNVINQPILQ LQSQPIWTTN 360 DPSFRFKLSD EQCRSNNNPY IQSSSSLKAN EMYRYEQLRR NGETPPPIIH PLPQQPLNPQ 420 NYQLSSSSSG GRVGVGGPLE TIHEQLQRQW SSNKSSNGWP YVSTQLFTPT LQHHQDSHRR 480 PQNLQVGLQR LMDSSL

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MLDLNDSPSG RKEKQSEGCS SQKTSVDGEE KGKGVGSFSN SSSSALVVSE EEESGGRKNK  60
SSMIFGFSVT HEDNCSSENE PVVTRQFFPM EESEMAGTAM GGFTPSFPRA QWVGVKFCQS  120
EPVGSAKPME VISQPMKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT  180
AHSAARAYDR AAIKFRGVEA DINFSLNDYE DDLKQMSNLT KEEFVHVLRR QSTGFPRGSS  240
KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDTEVEAARA YDKAAIKCNG KEAVTNFDPS  300
IYEDELNPGT GNNKDHNLDL CLGNSTSKHD HVDQSKDDNR FNVINQPILQ LQSQPIWTTN  360
DPSFRFKLSD EQCRSNNNPY IQSSSSLKAN EMYRYEQLRR NGETPPPIIH PLPQQPLNPQ  420
NYQLSSSSSG GRVGVGGPLE TIHEQLQRQW SSNKSSNGWP YVSTQLFTPT LQHHQDSHRR  480
PQNLQVGLQR LMDSSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-124	AP2 family protein