PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15752.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 433aa    MW: 47387 Da    PI: 9.7673
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.33e-09626425
                ---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                elCr+f+  G C++GdrCkF H
  OVA15752.1  6 ELCRNFQS-GSCRFGDRCKFLH 26
                8*******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MNRRNELCRN FQSGSCRFGD RCKFLHENQQ QSKPNSFGFG SQSPNTNQQQ QKPNPFGFGA  60
QSNSQPKGPP DFGSKNQAQF KPFENKWNRF SSTAATNSTP ARKDDNKPQL ADHKCTDPEL  120
CKHQIVEDLN QERPLWKLTC YGHCKYRLCD IVGDISYEEL RALAYDDAKK GMPLQSMVER  180
ERNLLNSKLL EFENLLRNPY VISNTVPIGP SSFPATNLNS PPLNVQNNVP PTVSSFSQLG  240
ASLGRGTSNP APSNSTFMQP SPFQTPSQNM GGVGNNNFAF GTPNPASLGG QKPMQPLGST  300
FNIPNFNNGS VNTGSNPPAV SFAAPVQFPS SRSNPSPFGI NAASASAAST VGQASINCRS  360
ITQIICHCLL FFSGMTRIQE FGRSRSGVMK RYPKKRLLIN LYGDSFTARM NTSTDVSKGP  420
YYTRGGDTSI SSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.17e-68C3H family protein