PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA15589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | LBD | ||||||||
Protein Properties | Length: 246aa MW: 27383.6 Da PI: 4.8821 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 121.2 | 5.6e-38 | 7 | 106 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++Cv+apyf+ +q +++fa+vhk+FGasnv+kll+++p ++r++a+ s+ yeA ar+++P yG+v+ i++lqqq++ l++e+++l+ OVA15589.1 7 SCGACKFLRRKCNNGCVFAPYFCYDQaAAHFAAVHKVFGASNVSKLLSNVPVHNRSEAAVSISYEALARMHNPTYGCVAQIFALQQQVAILQEEIEQLE 105 6************************978*******************************************************************9887 PP DUF260 99 e 99 + OVA15589.1 106 T 106 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGGHGSSCGA CKFLRRKCNN GCVFAPYFCY DQAAAHFAAV HKVFGASNVS KLLSNVPVHN 60 RSEAAVSISY EALARMHNPT YGCVAQIFAL QQQVAILQEE IEQLETQGGP HRATHDVINR 120 PSSQSMNDNS TLFRFSSSQL NDLNLHDYCN QQVHDPSNVM MNLNGNIMAL NKDTNLEIPE 180 QHIWGNHLFS EDYTNEINSL EMRQLPIIGT TEQEIYPWLD DAAGMQSSTQ LINPSLLDDL 240 LGEIDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06080.1 | 1e-32 | LBD family protein |