PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14720.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 709aa MW: 78990.8 Da PI: 6.4298

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.8	4.2e-23	133	234	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k+lt sd++++g +++ +k+a+e + +++ +++l +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + ++++l+v OVA14720.1 133 FCKILTASDTSTHGGFSVLRKHANESlppldMTQPTPTQELLAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL--RGENGNLRV 229 99*******************9999666677789********************************************..449999* PP EEE-S CS B3 95 kvfrk 99 +v+r+ OVA14720.1 230 GVRRH 234 ***97 PP
2	Auxin_resp	99.6	4.4e-33	259	338	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++tk+ F v+ +Pr+ s+F+v+++k+++++++ +svGmRfkm+fe+eds+err++Gt+vg+sd++p +W +SkWrsLk OVA14720.1 259 ASHAVATKTLFIVYNKPRT--SQFIVSLNKYLESVSNGFSVGMRFKMRFEGEDSPERRFTGTIVGTSDISP-QWADSKWRSLK 338 789*************6..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MRSIRGPSNS PSNFPGELHN TGFGSDDLYY ELWRACAGPL VDVPRLDERV YYFPQGHMEQ 60 LEASTNEELS QRIPLFNLPS KILCRVVHIE LLAEQETDEV YARITLQPES DQTEPRSPDP 120 CLPESARPSV QSFCKILTAS DTSTHGGFSV LRKHANESLP PLDMTQPTPT QELLAKDLHG 180 YEWRFKHIFR GQPRRHLLTT GWSTFVTSKR LVAGDAFVFL RGENGNLRVG VRRHARQQSN 240 MPSSVISSQS MHLGVLATAS HAVATKTLFI VYNKPRTSQF IVSLNKYLES VSNGFSVGMR 300 FKMRFEGEDS PERRFTGTIV GTSDISPQWA DSKWRSLKVQ WDEPSSIQRP DRVSPWEIEP 360 FVASAPSKPI QPVVAKNKRL RPSIDIPVHG TTTGSAAPAL WYPGSTQSHD LTALSGPEVQ 420 SSESQDVWPP KQKENVGNLF NSSSNGICSP RVQPEAHANV SLDLFQDMLK DDRTVSMWPG 480 LLGYSISDHS SKPRNDSMVD QVEQGKKSET PSGYRLFGIE LINNKNIPAH IVKEPPNETI 540 VSSISTEGTA PSTISGSESD QQSALSNASK EQQGLFQVSP KEIQPKSIST STRSRTKVHM 600 QGVAVGRAVD LTTLDGYDHL INELEEMFEI KGELSPRDKW EVVFTDDEGD MMLVGDDPWP 660 EFCKMVRKIF IYSSQEVRKM NPGRSRLLIT SLGGEGTLVN LDSNLKTDN

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MRSIRGPSNS PSNFPGELHN TGFGSDDLYY ELWRACAGPL VDVPRLDERV YYFPQGHMEQ  60
LEASTNEELS QRIPLFNLPS KILCRVVHIE LLAEQETDEV YARITLQPES DQTEPRSPDP  120
CLPESARPSV QSFCKILTAS DTSTHGGFSV LRKHANESLP PLDMTQPTPT QELLAKDLHG  180
YEWRFKHIFR GQPRRHLLTT GWSTFVTSKR LVAGDAFVFL RGENGNLRVG VRRHARQQSN  240
MPSSVISSQS MHLGVLATAS HAVATKTLFI VYNKPRTSQF IVSLNKYLES VSNGFSVGMR  300
FKMRFEGEDS PERRFTGTIV GTSDISPQWA DSKWRSLKVQ WDEPSSIQRP DRVSPWEIEP  360
FVASAPSKPI QPVVAKNKRL RPSIDIPVHG TTTGSAAPAL WYPGSTQSHD LTALSGPEVQ  420
SSESQDVWPP KQKENVGNLF NSSSNGICSP RVQPEAHANV SLDLFQDMLK DDRTVSMWPG  480
LLGYSISDHS SKPRNDSMVD QVEQGKKSET PSGYRLFGIE LINNKNIPAH IVKEPPNETI  540
VSSISTEGTA PSTISGSESD QQSALSNASK EQQGLFQVSP KEIQPKSIST STRSRTKVHM  600
QGVAVGRAVD LTTLDGYDHL INELEEMFEI KGELSPRDKW EVVFTDDEGD MMLVGDDPWP  660
EFCKMVRKIF IYSSQEVRKM NPGRSRLLIT SLGGEGTLVN LDSNLKTDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein