PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14603.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 434aa MW: 47452.4 Da PI: 8.4673

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.3	2.4e-33	52	217	3	135
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg........... 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ ++ ++ ++ +++ +s++ n++ + OVA14603.1 52 GGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLQIPPGTFGqfPQSMMVSQEINHQMQsslaslvdsyv 150 78***********************************************************555552223211111111111111123446666777 PP TCP 89 ....................kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135 + + +++++ +++ ++++ +nl+ r+k ++ a+e t++++r ++ OVA14603.1 151 kddahathllrsskgagftiNDNIDKQQEDQTTGPKSKYWNLNSPLRSKCKEVAHETTTDDQRSNWI 217 77777888888888999998666666677777888888999999999*******99999988875 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MITNSRGKDF PAKQEAGGNN DNGKITKASA SSRSSWSGLK DPRVVRVSRT FGGKDRHSKV 60 CTVRGLRDRR VRLSVPTAIQ LYDLQDRLGL NQPSKVVDWL LNAAKDEIDE LPPLQIPPGT 120 FGQFPQSMMV SQEINHQMQS SLASLVDSYV KDDAHATHLL RSSKGAGFTI NDNIDKQQED 180 QTTGPKSKYW NLNSPLRSKC KEVAHETTTD DQRSNWISSK RSNIEQGSQE DHVEVHNAQV 240 VSSHSFPTRT SLSSLQGLQN NVIQQNAFYH WDPSNLSLSQ LGSHAGGGYS SSQTEDPHNF 300 NVLSMTSSSQ SLSLPSGSQL LVCPSGAATP PFFQPYVTST TPMESSNPRQ MINHFQMLSS 360 AAGLQNLPLN SLTPSLYSIS PGTPTMRPLQ LGVNINPKLL HSQNNNGGDD QPNKGNTGPS 420 SSFTSSYSFQ NDQN

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MITNSRGKDF PAKQEAGGNN DNGKITKASA SSRSSWSGLK DPRVVRVSRT FGGKDRHSKV  60
CTVRGLRDRR VRLSVPTAIQ LYDLQDRLGL NQPSKVVDWL LNAAKDEIDE LPPLQIPPGT  120
FGQFPQSMMV SQEINHQMQS SLASLVDSYV KDDAHATHLL RSSKGAGFTI NDNIDKQQED  180
QTTGPKSKYW NLNSPLRSKC KEVAHETTTD DQRSNWISSK RSNIEQGSQE DHVEVHNAQV  240
VSSHSFPTRT SLSSLQGLQN NVIQQNAFYH WDPSNLSLSQ LGSHAGGGYS SSQTEDPHNF  300
NVLSMTSSSQ SLSLPSGSQL LVCPSGAATP PFFQPYVTST TPMESSNPRQ MINHFQMLSS  360
AAGLQNLPLN SLTPSLYSIS PGTPTMRPLQ LGVNINPKLL HSQNNNGGDD QPNKGNTGPS  420
SSFTSSYSFQ NDQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	4e-45	TCP family protein