PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14582.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 552aa MW: 60803.3 Da PI: 7.532

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.1	1.9e-41	175	250	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvC++hsk+++v+v+g+eqrfCqqCsrfh l +fD++krsCr+rLa+hnerrrk+q OVA14582.1 175 CQVLGCNKDLSSSKDYHKRHKVCDIHSKTAKVIVNGIEQRFCQQCSRFHLLADFDDGKRSCRKRLAGHNERRRKPQ 250 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MESWNFGSEG KGFVLSDEFV SSTDTLSRSR TVSNGWDHKT PFNYESTMMV SGRDAIENQG 60 VMEFGFPNII RKQHPGNSIG GFTDGSIGSG RVSSSSSCMV TLKAFLGEQE SSSRLSSSVV 120 DSNSQDSSLI DLKLGRLTDY RDAQNSKQSK EVPVVSSLPE KRSRTTSLSS QTPFCQVLGC 180 NKDLSSSKDY HKRHKVCDIH SKTAKVIVNG IEQRFCQQCS RFHLLADFDD GKRSCRKRLA 240 GHNERRRKPQ LDNHYSKTGK LLPSFHGSRF LEPSLPTRTS FICTEIFPRD TQHPDKYGTA 300 NWSKRVKLED GTSYSPQSSI PITNGHMFSK SFLLPYEQRY PSFNGNVNQT ASGSMSYENN 360 RYPQDFPGPS SISQSVLRNT SSGSEDFTVY DTASTIQGVS GVSDSGCALS LLSSQSRNSS 420 SRSSEIPMAC PLIIQGNHAH YSQFSEKILG LSSEASTSVA SNRFSSSGMN SVEVDPGTIL 480 VSDASDAVDF EVHNNGIFQA SEFMSAKVPL SDEHGNTVDL LQLSSQLQRV ERQRLSLQVK 540 QENDAFCCFP IT

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MESWNFGSEG KGFVLSDEFV SSTDTLSRSR TVSNGWDHKT PFNYESTMMV SGRDAIENQG  60
VMEFGFPNII RKQHPGNSIG GFTDGSIGSG RVSSSSSCMV TLKAFLGEQE SSSRLSSSVV  120
DSNSQDSSLI DLKLGRLTDY RDAQNSKQSK EVPVVSSLPE KRSRTTSLSS QTPFCQVLGC  180
NKDLSSSKDY HKRHKVCDIH SKTAKVIVNG IEQRFCQQCS RFHLLADFDD GKRSCRKRLA  240
GHNERRRKPQ LDNHYSKTGK LLPSFHGSRF LEPSLPTRTS FICTEIFPRD TQHPDKYGTA  300
NWSKRVKLED GTSYSPQSSI PITNGHMFSK SFLLPYEQRY PSFNGNVNQT ASGSMSYENN  360
RYPQDFPGPS SISQSVLRNT SSGSEDFTVY DTASTIQGVS GVSDSGCALS LLSSQSRNSS  420
SRSSEIPMAC PLIIQGNHAH YSQFSEKILG LSSEASTSVA SNRFSSSGMN SVEVDPGTIL  480
VSDASDAVDF EVHNNGIFQA SEFMSAKVPL SDEHGNTVDL LQLSSQLQRV ERQRLSLQVK  540
QENDAFCCFP IT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	6e-50	SBP family protein