PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14499.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 403aa MW: 43963.2 Da PI: 7.2396

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.4	1e-37	40	178	2	108
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssaseceaesssssasnsssg. 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++ +++++s+ ++ +++++ +++g OVA14499.1 40 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELppwhptattttGNPPKSSEQDLDEENQRRGENEGf 138 79**************************************************************99998887765444443334444444444444448 PP TCP 89 ....................kaaksaakskksqksaasal 108 ++++++++ ++++++++s+l OVA14499.1 139 vgsskrpmaveptesryvfhHQQQEQQHLQNNPSNSNSFL 178 8888899999988855555433333334444444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MGETQNRQQS SRLGLLRGGG GGGGGGEIIE VQGGHIVRST GRKDRHSKVC TAKGPRDRRV 60 RLSAHTAIQF YDVQDRLGYD RPSKAVDWLI KKAKAAIDEL AELPPWHPTA TTTTGNPPKS 120 SEQDLDEENQ RRGENEGFVG SSKRPMAVEP TESRYVFHHQ QQEQQHLQNN PSNSNSFLPP 180 SLDSDAIADT IKSFFPMATS SSSIHFQNYP PPPDLLSRTS SQTQDLRLSL QSFPDPMLLH 240 HHHHHSNPSS SSEQALFSTA FDAGTTSWSE QQMPEMGRFQ RMIAWNPNTD SSGGGGGFMF 300 NSPPPPQQPV QTLLGQNPLF SQRGPLQSSN SPSVRAWSND PSMVGATDHY QNLAAVHHHQ 360 SSISGTGFAS GGFSGFRIPA RIQGEEEHDA GGSNKPPSSA SRH

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MGETQNRQQS SRLGLLRGGG GGGGGGEIIE VQGGHIVRST GRKDRHSKVC TAKGPRDRRV  60
RLSAHTAIQF YDVQDRLGYD RPSKAVDWLI KKAKAAIDEL AELPPWHPTA TTTTGNPPKS  120
SEQDLDEENQ RRGENEGFVG SSKRPMAVEP TESRYVFHHQ QQEQQHLQNN PSNSNSFLPP  180
SLDSDAIADT IKSFFPMATS SSSIHFQNYP PPPDLLSRTS SQTQDLRLSL QSFPDPMLLH  240
HHHHHSNPSS SSEQALFSTA FDAGTTSWSE QQMPEMGRFQ RMIAWNPNTD SSGGGGGFMF  300
NSPPPPQQPV QTLLGQNPLF SQRGPLQSSN SPSVRAWSND PSMVGATDHY QNLAAVHHHQ  360
SSISGTGFAS GGFSGFRIPA RIQGEEEHDA GGSNKPPSSA SRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-84	TCP family protein