PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA14466.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 404aa    MW: 44034.2 Da    PI: 7.6014
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA14466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.21.4e-08148168526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C++f++ G Ck+Gd+C +aHg
  OVA14466.1 148 ACPDFRK-GNCKRGDTCEYAHG 168
                 7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MMMMIGEGNQ QNHPTVHVPP WSLFDDSTAG MGYPLPVSGV NGNATGGGGG GGVGGGGGDY  60
SPLLIGEALS ALQRYLPSND IDSDSDISGR ESDIPVDAYS CDEFRMYEFK VRRCARGRSH  120
DWTECPYAHP GEKARRRDPR KFHYSGTACP DFRKGNCKRG DTCEYAHGVF ECWLHPARYR  180
TQPCKDGTSC RRRVCFFAHT PEQLRVLPQQ SPRTAESPPS YDGSPLRVAL DSYFGNGASM  240
LSSPTSTLIS PPISPTSDSP PMSPNCPSLN RPVGSNSVNE MVLSLRNLQL NKVKSSPPSW  300
GGVQIGSGFC SPRGTSASTL RPGFSSLPTT PTRTPTRSGI GYLDFWDRCT SLEEEPAMER  360
VESGRNLRSK IYEKLSKENS LERVERVDSP APAPDVGWVS ELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-110C3H family protein