PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14390.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 324aa MW: 36842.3 Da PI: 8.1322

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14390.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.7	2e-18	160	213	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ +++k+q +Le+ F++n++++ +++ LAk+l+L rqV vWFqNrRa+ k OVA14390.1 160 KKLRLSKDQSAILEDSFKENNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 213 566899**********************************************98 PP
2	HD-ZIP_I/II	127.2	7.3e-41	159	248	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LE+sF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+kev+eLr +l OVA14390.1 159 NKKLRLSKDQSAILEDSFKENNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQELR-AL 248 59*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MMVGMEDLGL SLSLNSTDNH HHSHNRHAST LQLNLMPSSS SSSPSHLFSL HHQKSSWNEA 60 FASSSDRNSK MYRGIGGGEM RSSFLRGIDV NRKPSSTTID CELEEEEAGV SSPNSTISSL 120 SGKRSERDEE INEMERACSR GLIINSDEED GSDPNSRNNK KLRLSKDQSA ILEDSFKENN 180 TLNPKQKLAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEFLKRCCEN LTDENRRLQK 240 EVQELRALKL SPQFYMQMTP PTTLTMCPSC ERVASTTAVD HHHHNHHPMV VSPQNHHRPM 300 PINRFGPPAR SIADHSMMLH LDRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	216	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	4e-80	HD-ZIP family protein