PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA14243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | C3H | ||||||||
Protein Properties | Length: 364aa MW: 40184.7 Da PI: 8.1438 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 46.4 | 6.6e-15 | 289 | 314 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +ktelC+ +++tG C+yGd C+FaHg OVA14243.1 289 FKTELCNKWQETGACPYGDHCQFAHG 314 79***********************8 PP | |||||||
2 | zf-CCCH | 20.9 | 6.1e-07 | 327 | 351 | 1 | 25 |
--S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaH 25 ykte Cr + +G C+yG rC+F H OVA14243.1 327 YKTEVCRMVLSGGNCPYGHRCHFRH 351 9**********************88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MQRDDSSSTR GRINSTTDSS PIRSQNEYYY SSSNQNTSSD GTGFTSLESS IFPPKSSLCN 60 SVYQFTPSPS SSNEENNPVA TENRLYLARL TLQYQELMDR YGLCLGYLED ATKQAEVLSQ 120 ENAALRLVNK DLTKRLSLLA ETSLHQNHRY ISSGFPSLSI INDFRSLCIG DNGGTKNNRV 180 VASHEVPVTS PTSVIGINNR FPEKGPQRVS LPKSISIRSS AYLKMNQAGI NAAAAANRTN 240 RLRVATSPLV NGNMQRVYVP AAAAAAAGGE NKEDDQEPLE LDVYNQGMFK TELCNKWQET 300 GACPYGDHCQ FAHGIGELRP VIRHPRYKTE VCRMVLSGGN CPYGHRCHFR HALTEQERIT 360 GTTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68200.1 | 5e-67 | C3H family protein |