PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA14078.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | NF-YC | ||||||||
Protein Properties | Length: 115aa MW: 12771.9 Da PI: 9.7052 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 118.5 | 3e-37 | 21 | 103 | 18 | 99 |
NF-YC 18 nhelPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 h+lPlarikki+k + +dvkmis eaP+l+skacelfi e+t+rsw+++ + krrtl+k d+a av +tdifdflvd+v + OVA14078.1 21 PHSLPLARIKKIMKkSGDDVKMISGEAPILFSKACELFIEEITVRSWMKTLQGKRRTLHKEDVARAVIETDIFDFLVDVVSDS 103 599**********825689************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
MRQPGIYSEM LSGGISGKTG PHSLPLARIK KIMKKSGDDV KMISGEAPIL FSKACELFIE 60 EITVRSWMKT LQGKRRTLHK EDVARAVIET DIFDFLVDVV SDSKISCDKI RATSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 4e-35 | NF-YC family protein |