PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13944.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 303aa    MW: 33408.5 Da    PI: 7.7509
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.53.2e-1362106147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT +E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       OVA13944.1  62 RESWTDQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 106
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MVSVNPNPSS SSGVVGGGFY FDHKPIEMSG LPGLGSVSVT TTDLYEDPTK KIRKPYTITK  60
SRESWTDQEH DKFLEALQLF DRDWKKIEAF VGSKTVIQIR SHAQKYFLKV QKNGTSEHLP  120
PPRPKRKAAH PYPQKATKNA PTLPQRTGAL QSSSSLLESG YVLRPDSSSV LRNSISGPAV  180
SSWAHSSEPL VSVSHVSKDD TRSARPIVSN NCFSGNENTL NPYPTCETTD QGNIGPPLRA  240
IPDFTQVYSF IGSIFDPNTS DHLQKLKEMD PIDVDTVMLL MRNLSVNLSS PDFEDHVSSA  300
SIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.29e-90MYB_related family protein