PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13822.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 563aa MW: 61231.1 Da PI: 5.5917

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.4e-18	41	88	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l OVA13822.1 41 KGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLYRCGKSCRLRWANHL 88 79******************************************9986 PP
2	Myb_DNA-binding	50.9	3.6e-16	94	137	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++Tt+E+ l+v+++ ++G++ W++ a++++ gRt++++k++w++ OVA13822.1 94 KGAFTTDEERLIVELHSKMGNK-WARMAAHLP-GRTDNEIKNYWNT 137 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MSHSTNESED ELLSKDQSDS QSIDEGSCGG SFGGGGAVLK KGPWTSAEDA ILVDYVKKHG 60 EGNWNAVQKH SGLYRCGKSC RLRWANHLRP NLKKGAFTTD EERLIVELHS KMGNKWARMA 120 AHLPGRTDNE IKNYWNTRIK RRQRAGLPLY PPEVCMQALT GSHQTQKTDE FNNVDTQQHG 180 LLQANNYEIP DVTFDSLKAN QGVLSFEPTL SDIAVSSMLS QGLGSSLNYS FIPPTMHRPK 240 RLREPEHLFP GFNSSFTSGV SPFDQFQSDN CDKIHRPFGL SFPYDPNRKI KKSSPFGARS 300 GSHAFLNGNI STSKPISGPV KMELPSFQYS DIDLGSMGTS PMLPSLESVD TFTQSPLSSG 360 QVQSDCLSPR NSGLLDALLH ESQTLNSAKN QSSEKSSSSS FVTPSDIMDG STPNLCETEW 420 EDYGDPISPL GRSAASVFGA CTPISGSSLD DPPLSEALPA GSNVKQEPIE QISVLDGGEK 480 EISAQFDFSR PDALLGAGWL DRSSGCAKAH SIKTGDTLET LLGEDLCNDY KYMTGTSTIN 540 QGWGIGSIPW SNMPDACHMS KLP

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MSHSTNESED ELLSKDQSDS QSIDEGSCGG SFGGGGAVLK KGPWTSAEDA ILVDYVKKHG  60
EGNWNAVQKH SGLYRCGKSC RLRWANHLRP NLKKGAFTTD EERLIVELHS KMGNKWARMA  120
AHLPGRTDNE IKNYWNTRIK RRQRAGLPLY PPEVCMQALT GSHQTQKTDE FNNVDTQQHG  180
LLQANNYEIP DVTFDSLKAN QGVLSFEPTL SDIAVSSMLS QGLGSSLNYS FIPPTMHRPK  240
RLREPEHLFP GFNSSFTSGV SPFDQFQSDN CDKIHRPFGL SFPYDPNRKI KKSSPFGARS  300
GSHAFLNGNI STSKPISGPV KMELPSFQYS DIDLGSMGTS PMLPSLESVD TFTQSPLSSG  360
QVQSDCLSPR NSGLLDALLH ESQTLNSAKN QSSEKSSSSS FVTPSDIMDG STPNLCETEW  420
EDYGDPISPL GRSAASVFGA CTPISGSSLD DPPLSEALPA GSNVKQEPIE QISVLDGGEK  480
EISAQFDFSR PDALLGAGWL DRSSGCAKAH SIKTGDTLET LLGEDLCNDY KYMTGTSTIN  540
QGWGIGSIPW SNMPDACHMS KLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	1e-117	MYB family protein