PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13761.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 400aa MW: 44974.6 Da PI: 6.0251

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	32.5	2.1e-10	71	127	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n ++k+ + g ++ +e Aa ++ a+ k++g OVA13761.1 71 SIYRGVTRHRWTGRYEAHLWDkNSWNPiQNKKGRQGAYDDEEAAAHTYDLAAIKYWG 127 57*****************77777788888888******************98 PP
2	AP2	51.5	2.5e-16	170	221	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg+f t eeAa+a++ a+ +++g OVA13761.1 170 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTFSTQEEAAAAYDVAAIEYRG 221 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MKSSPPSSTC SSSASTTDDH SVSLHNNQLP LSPPPPPPPP SKSAKPKIRR TRRTPNPEKR 60 QFNNSPGRRS SIYRGVTRHR WTGRYEAHLW DKNSWNPIQN KKGRQGAYDD EEAAAHTYDL 120 AAIKYWGRDT IVNFPATTYE KEIEEMRNVS KEEYLASLRR RSSGFSRGVS KYRGVARHHH 180 NGRWEARIGR VFGNKYLYLG TFSTQEEAAA AYDVAAIEYR GMNAVTNFDI SRYVKFPQLS 240 PPQFQQSSSS YFIESQEMTP SHQIPTPELP QSIDQSTVIH PIEEDPWSLC MDSGFNPLPV 300 PNISLEKSSE LPDLFNDTGF EDNIEFLFEG ILGNNKEGLR SNEEEDNGIN LDGIFDNSIE 360 FDGGDLLGGL GVDGEEQSLN NASTRNSSSV SYPFPIRICS

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MKSSPPSSTC SSSASTTDDH SVSLHNNQLP LSPPPPPPPP SKSAKPKIRR TRRTPNPEKR  60
QFNNSPGRRS SIYRGVTRHR WTGRYEAHLW DKNSWNPIQN KKGRQGAYDD EEAAAHTYDL  120
AAIKYWGRDT IVNFPATTYE KEIEEMRNVS KEEYLASLRR RSSGFSRGVS KYRGVARHHH  180
NGRWEARIGR VFGNKYLYLG TFSTQEEAAA AYDVAAIEYR GMNAVTNFDI SRYVKFPQLS  240
PPQFQQSSSS YFIESQEMTP SHQIPTPELP QSIDQSTVIH PIEEDPWSLC MDSGFNPLPV  300
PNISLEKSSE LPDLFNDTGF EDNIEFLFEG ILGNNKEGLR SNEEEDNGIN LDGIFDNSIE  360
FDGGDLLGGL GVDGEEQSLN NASTRNSSSV SYPFPIRICS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-85	AP2 family protein