PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13669.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 432aa MW: 50352.3 Da PI: 7.2227

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13669.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00065	170	192	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C + F++ks+L+rH +++ OVA13669.1 170 FFCEFCLTFFKHKSQLQRHKKKC 192 67*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MDSPPRTRGK KPSTSKIPVN QQQQQSGVDN SSANLPEDDA SKKKNAEFLP FKAGNQLLCR 60 WRDGIYYPVK IIARRKLVDG GVDDFEYYVH YIQFNSRLDE WVRLEQLDLD SLKTNIAEEG 120 HEELDAALLY EHEKVTKVKN IETIELGSYK IETWYFSPCP AEYNDCRELF FCEFCLTFFK 180 HKSQLQRHKK KCDSRQPPGN EIYRDGTLSI YEASFHALLH TPNMLKQVDP KKNWVYSENL 240 WILAKLFLEN KAPLKDINRF LFYVLCECDD SGCHMVAYFS KRKDPEGIYN LSYILTLPPY 300 QRRGYGAFLI AFSYELSKKE GKAAGAPERP LSDLGRRCYE RYWTWVLLNI LKQRRDDFSI 360 QELSQMTAIH IGDIAKTLQD LELIQSTKEL QTRHCMDTET LDRLLRDAAG PPGGLKFDVT 420 KLDWTPYKQE QS

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MDSPPRTRGK KPSTSKIPVN QQQQQSGVDN SSANLPEDDA SKKKNAEFLP FKAGNQLLCR  60
WRDGIYYPVK IIARRKLVDG GVDDFEYYVH YIQFNSRLDE WVRLEQLDLD SLKTNIAEEG  120
HEELDAALLY EHEKVTKVKN IETIELGSYK IETWYFSPCP AEYNDCRELF FCEFCLTFFK  180
HKSQLQRHKK KCDSRQPPGN EIYRDGTLSI YEASFHALLH TPNMLKQVDP KKNWVYSENL  240
WILAKLFLEN KAPLKDINRF LFYVLCECDD SGCHMVAYFS KRKDPEGIYN LSYILTLPPY  300
QRRGYGAFLI AFSYELSKKE GKAAGAPERP LSDLGRRCYE RYWTWVLLNI LKQRRDDFSI  360
QELSQMTAIH IGDIAKTLQD LELIQSTKEL QTRHCMDTET LDRLLRDAAG PPGGLKFDVT  420
KLDWTPYKQE QS