PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13535.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 1043aa MW: 115937 Da PI: 6.5605

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.8	1e-40	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+ +lv +++qrfCqqCsrfh l+efD++krsCrrrLa+hn+rrrk+++ OVA13535.1 148 ICQVENCGADLSNAKDYHRRHKVCEMHSKASGALVGNVMQRFCQQCSRFHVLQEFDKDKRSCRRRLAGHNRRRRKTHP 225 5**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1043 aa Download sequence
METKIGGKAQ NFCSPGTSDF VSREKELKAE GKRSSEWDLN SWNWDGDLFI ASPLNSAPPD 60 RRSKQLFPIT AKSNSSSSCS DEINLGSEKE KRELEKRRKV IVIEDDKLNE EAGNLTLKLG 120 RHESEGTNPD GNDEKKTELR GETSNRAICQ VENCGADLSN AKDYHRRHKV CEMHSKASGA 180 LVGNVMQRFC QQCSRFHVLQ EFDKDKRSCR RRLAGHNRRR RKTHPDTAGH GTPLNEDQAS 240 SYPLISLLRI LSNMHSSNTD QLTNKDLLSH FLRNLAGFAG IFGGSNLSGL LQETQDFLTT 300 GASAGRSSKI VPALLSNLPE PSRILASTSN ANGSIDAQGL QIRPMNQYGN VDASEMPQKG 360 IVAENARGVV LQTVPSPKSK TLFPIRDSLP VKTVAPETRM IKLNNIDLNN ISTDSEDCID 420 GLEMSQQPGS LGTGSLDSAL WLQKDTHQPS PPQTSGNSDS ERSPSSSNGD ARSRTDRIVF 480 KLFGKDPNDF PLALRAQILD WLSHTPTDIE SYIKPGCIIL TIYLRLAEST WEELCGDLSS 540 TLSALLDAPY NTFWRTGWIY TRVQHQIAFI YNGQVVLDTP LSLKREYHRR ISSVIPIAVS 600 VSERAQFIVK GFNLLGPSTR LLCALEGKYL LHEVSHDLVE DADTFKKHDE LQFLSFPCSI 660 PDIIGRGFIE VEDHGLSNSF FPFIVAEEDV CSDIRMLESA IEVAESGDSI HGTSEIEAKK 720 NQALDFIHEM GWLLHRSRLR SRLGDTDSSL DVFPSTRFRW LMEFSMDRDW CGVVKKLLEI 780 LFNGTVGSGE HSSVELALLE MGLLHRAVRR SCRPMVELLL RFVPDKASDT EGSELKPMVD 840 NGSKSFLFRP DAAGPAGLTP LHIAAGTDGS ENILDALTDD PGQVGVEAWK KARDDTGYAP 900 EDYALLRGHF AYIHLVQKKI DKKSETGHLI LDIPWVEPLD CSNNNHQQKQ TDKLNSAKPS 960 GFQIDKTETR PNLIQQPSCK LCHQQVLVHH GNTRRLVVHR SVMLSMVAIA AVCVCVALLF 1020 KSSPEVLCVF SPFRWELLDY GSI

Sequence ? help Back to Top

Protein Sequence Length: 1043 aa Download sequence

METKIGGKAQ NFCSPGTSDF VSREKELKAE GKRSSEWDLN SWNWDGDLFI ASPLNSAPPD  60
RRSKQLFPIT AKSNSSSSCS DEINLGSEKE KRELEKRRKV IVIEDDKLNE EAGNLTLKLG  120
RHESEGTNPD GNDEKKTELR GETSNRAICQ VENCGADLSN AKDYHRRHKV CEMHSKASGA  180
LVGNVMQRFC QQCSRFHVLQ EFDKDKRSCR RRLAGHNRRR RKTHPDTAGH GTPLNEDQAS  240
SYPLISLLRI LSNMHSSNTD QLTNKDLLSH FLRNLAGFAG IFGGSNLSGL LQETQDFLTT  300
GASAGRSSKI VPALLSNLPE PSRILASTSN ANGSIDAQGL QIRPMNQYGN VDASEMPQKG  360
IVAENARGVV LQTVPSPKSK TLFPIRDSLP VKTVAPETRM IKLNNIDLNN ISTDSEDCID  420
GLEMSQQPGS LGTGSLDSAL WLQKDTHQPS PPQTSGNSDS ERSPSSSNGD ARSRTDRIVF  480
KLFGKDPNDF PLALRAQILD WLSHTPTDIE SYIKPGCIIL TIYLRLAEST WEELCGDLSS  540
TLSALLDAPY NTFWRTGWIY TRVQHQIAFI YNGQVVLDTP LSLKREYHRR ISSVIPIAVS  600
VSERAQFIVK GFNLLGPSTR LLCALEGKYL LHEVSHDLVE DADTFKKHDE LQFLSFPCSI  660
PDIIGRGFIE VEDHGLSNSF FPFIVAEEDV CSDIRMLESA IEVAESGDSI HGTSEIEAKK  720
NQALDFIHEM GWLLHRSRLR SRLGDTDSSL DVFPSTRFRW LMEFSMDRDW CGVVKKLLEI  780
LFNGTVGSGE HSSVELALLE MGLLHRAVRR SCRPMVELLL RFVPDKASDT EGSELKPMVD  840
NGSKSFLFRP DAAGPAGLTP LHIAAGTDGS ENILDALTDD PGQVGVEAWK KARDDTGYAP  900
EDYALLRGHF AYIHLVQKKI DKKSETGHLI LDIPWVEPLD CSNNNHQQKQ TDKLNSAKPS  960
GFQIDKTETR PNLIQQPSCK LCHQQVLVHH GNTRRLVVHR SVMLSMVAIA AVCVCVALLF  1020
KSSPEVLCVF SPFRWELLDY GSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein