PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13376.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 636aa MW: 71295.3 Da PI: 6.1217

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.3	6.8e-12	311	367	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g OVA13376.1 311 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 367 78*****************433.44555535555.779999************98 PP
2	AP2	40.4	7.6e-13	412	462	3	55
AP2 3 ykGV.rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV r +++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OVA13376.1 412 YRGVtRLHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 462 9**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MSNSSWLGFS LTPHLSIDDG FGGGEEEEEE VGGFSSSHHH MSVMPLRSDG SLCVVDAFRR 60 STGADYFFIF VDWRYENTLA TSTTTERDDQ GPKLEDFLGG YSNSTPDHHQ NNDVYYQTHH 120 QQTFNEGDDG DHQDPNSGSC RINMNIPPPP ATFNNEVVER EMEDNLTNPS PLNQSFHHYH 180 ENPQTLMSNS DHLQSYNLNT NPNPNNNLYH HVPLDSATSI SGFKTWLRQA PFSSDQKSSV 240 VHDANNNNNN SNNFQTLSLS MSPGSQQPSS ALCSVQPSTT VTESRKRSVG KSLTREPVPR 300 KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCRKEGQT RKGRQGGYDK EEKAARAYDL 360 AALKYWGPTT HINFPLSTYE QELEEMKNMN RQEFVANLRR KSSGFSRGAS MYRGVTRLHH 420 QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVSAVTNFD ISKYDVKRIC 480 SSSTLIGGDL AKRSPRDSSS ASHEHESGQQ PLAITNVDQS IQSSDEFATI MWSNNSDEQE 540 QHQNQNQITN DPNSSVHSMS HQNSSNPGSP KSSVASQSEY DHNVGGGEYS QFSMNSTKYE 600 NGSDDQCPVN WMAAATDRPA NLSVVHQLPM FALWNE

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MSNSSWLGFS LTPHLSIDDG FGGGEEEEEE VGGFSSSHHH MSVMPLRSDG SLCVVDAFRR  60
STGADYFFIF VDWRYENTLA TSTTTERDDQ GPKLEDFLGG YSNSTPDHHQ NNDVYYQTHH  120
QQTFNEGDDG DHQDPNSGSC RINMNIPPPP ATFNNEVVER EMEDNLTNPS PLNQSFHHYH  180
ENPQTLMSNS DHLQSYNLNT NPNPNNNLYH HVPLDSATSI SGFKTWLRQA PFSSDQKSSV  240
VHDANNNNNN SNNFQTLSLS MSPGSQQPSS ALCSVQPSTT VTESRKRSVG KSLTREPVPR  300
KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCRKEGQT RKGRQGGYDK EEKAARAYDL  360
AALKYWGPTT HINFPLSTYE QELEEMKNMN RQEFVANLRR KSSGFSRGAS MYRGVTRLHH  420
QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVSAVTNFD ISKYDVKRIC  480
SSSTLIGGDL AKRSPRDSSS ASHEHESGQQ PLAITNVDQS IQSSDEFATI MWSNNSDEQE  540
QHQNQNQITN DPNSSVHSMS HQNSSNPGSP KSSVASQSEY DHNVGGGEYS QFSMNSTKYE  600
NGSDDQCPVN WMAAATDRPA NLSVVHQLPM FALWNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-127	AP2 family protein