PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13337.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 271aa MW: 30872.4 Da PI: 8.3614

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.9	3.4e-15	71	130	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse....ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++g+++A+++d ++ ++ k k+++lg + t+e+Aa a++ a++k++g OVA13337.1 71 SNYRGVTRHRWTGKFEAHLWDNTTisetRKrKGKQVYLGGYETEEKAALAYDLAALKFWG 130 57*****************655665433555**********************987 PP
2	AP2	45.1	2.4e-14	175	226	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++ + rW A+I + + ++lg+++t+eeAa+a++ a+ kl+g OVA13337.1 175 SIYRGVTRQHEGRRWQARIGRV-----AggRDIYLGTYDTEEEAAEAYDIAAVKLRG 226 57**988889999885.....234***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MSTLVPENEE TSQSELIFTD QASSEGNFER LPSDTSHLVP LPSSSVVGPE SSSTGNDQVK 60 KALYKFGQRT SNYRGVTRHR WTGKFEAHLW DNTTISETRK RKGKQVYLGG YETEEKAALA 120 YDLAALKFWG TGAHTKLNFP ISNYEKEIEE MKDMSREEYI NSLRRKSICF ARGNSIYRGV 180 TRQHEGRRWQ ARIGRVAGGR DIYLGTYDTE EEAAEAYDIA AVKLRGMNAI TNFHISNYYK 240 EGSKELDILP IQTTEEERPT VTVRRFKLST T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-68	AP2 family protein