PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13226.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | FAR1 | ||||||||
Protein Properties | Length: 189aa MW: 21368.3 Da PI: 10.4279 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 71.3 | 2.2e-22 | 39 | 132 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY++Y++e GF++ k++s+k+ + +e + f+Cs++g ++++ ++ +k +r++++ +t+Cka++ + ++ + +w+v +++ +HnH+++ OVA13226.1 39 DFYQDYGREKGFTIHKRSSYKTAKGKELSRVLFTCSCQGVHKPKLSSneqPNKIKRNTSTMKTDCKASMFLALDPkSRTWYVRSFVDDHNHAMV 132 6*****************************************9988855556677899999*************9899*************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MATSEGIETT NDVQTPKSNK NPKKPFVGMD FSSIEEAQDF YQDYGREKGF TIHKRSSYKT 60 AKGKELSRVL FTCSCQGVHK PKLSSNEQPN KIKRNTSTMK TDCKASMFLA LDPKSRTWYV 120 RSFVDDHNHA MVTPSKRVLM RSNRYMHPAA KSLAEAFNKE KLRVGKVPSI FGGGSSNVSF 180 NSRDEMPKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22170.2 | 1e-15 | FAR1 family protein |