PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13081.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 339aa MW: 37628.6 Da PI: 7.7683

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.1	1.3e-17	178	232	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k OVA13081.1 178 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 232 778899***********************************************98 PP
2	HD-ZIP_I/II	127.9	4.2e-41	178	268	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk OVA13081.1 178 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 268 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MELGLSLGEV SRPFGGCTDK NRSKMNNKSL GFCMGLGVGG FNGRDEEKGE QSDEQQRNER 60 RVSADPPVQL DLLPLAPVPR NQPSSQTGFP WSSENGNSEV GSRGFDVNRL PSTEEADDGA 120 AISSPNSTVS SFQIDFSIYR NGSGSGSKRD SEIAGLNDVE TERTSSRASD EEENGLTRKK 180 LRLSKEQSAF LEESFKEHNT LNPKQKLALA KQLNLRPRQV EVWFQNRRAR TKLKQTEVDC 240 EYLKRCCETL TEENRRLQKE LQELRALKTS HPYYMQLPAT TLTMCPSCER VATTNTAAST 300 TTNTTTTTAT TSNTTAFSLN NKPRFYPFSH AHAHQSAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	183	TRKKLRL
2	227	235	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-82	HD-ZIP family protein