PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 228aa MW: 26534.1 Da PI: 9.2246 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.5 | 2.7e-19 | 89 | 143 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Le+ F+++++p+ ++++eLA++l+L rqV vWFqNrRa+ k OVA13031.1 89 RKKLRLTKEQSALLESSFKEHNTPNMAQKQELAERLDLRPRQVEVWFQNRRARTK 143 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 115.2 | 3.9e-37 | 89 | 177 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLE+sF+e+++ + +K+ela++L+l+prqv+vWFqnrRARtk+k++E+d+e+Lk+++++lkeen+rL+ke +eLr+ OVA13031.1 89 RKKLRLTKEQSALLESSFKEHNTPNMAQKQELAERLDLRPRQVEVWFQNRRARTKLKKTEVDCEVLKKCCESLKEENRRLKKELQELRS 177 69*************************************************************************************93 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MGEEEEECDI GLSLRLGSGE YTSRRTDERK RQVQLNFLFP SHPKKEIVDY EVHDDDRSSS 60 KTVNQNEEHA IKKDNTSVNS HINKYGTTRK KLRLTKEQSA LLESSFKEHN TPNMAQKQEL 120 AERLDLRPRQ VEVWFQNRRA RTKLKKTEVD CEVLKKCCES LKEENRRLKK ELQELRSIKF 180 GLPSPFYVQL PKTAALTVCP TCERIAKTST TDDKNNMVLD VMGKSNKF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 94 | TRKKLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 6e-57 | HD-ZIP family protein |