PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12872.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

DBB

Protein Properties

Length: 212aa MW: 23346.4 Da PI: 6.8348

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.4	1.2e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC++C ++ H OVA12872.1 4 LCDVCESAAAILFCAADEAALCRSCDVKVH 33 7**************************998 PP
2	zf-B_box	25.4	2.8e-08	53	91	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 +C+ +e+ ++ ++Ce +++ lC +C + H g H OVA12872.1 53 VARCDICENAPAFFYCEIDGSSLCLQCDMMVHVGgkrtH 91 679**************************9996544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRSCDV KVHMCNKLAS RHVRVGLADP SDVARCDICE 60 NAPAFFYCEI DGSSLCLQCD MMVHVGGKRT HGRYLLFRQR VKFPGDKPGK FEDLTLQPMN 120 PGDNTREPNQ PPRLTNGENL QNHRVSPVPG MDSNNDDHGK MDTKMIDLNA RPNRIYGQTS 180 NNQAQGIDVP SGSNHESASV VPVGSFKREP EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	2e-89	DBB family protein