PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12623.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 380aa MW: 43225.9 Da PI: 9.4893

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.7	4.7e-24	67	191	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................................tekerrtraetrtgCka 64 fYneYA vGFsvrk+k++ks+ +g+ r+f+Cskeg+++++ ++ +++ + ++ r+gC+a OVA12623.1 67 FYNEYAAIVGFSVRKDKTRKSNIDGSYLFRRFCCSKEGYPRKTLENnnntngkpmqvkdglvvkmesriqpvlrvgrrakldMKRRAEVQQRMRVGCNA 165 9*************************************999888899**************************98777777788999** PP FAR1 65 klkvkkekdgkwevtkleleHnHela 90 +l vk+++dgkw+++k+++eHnHe++ OVA12623.1 166 RLDVKRTTDGKWVIQKFVEEHNHECV 191 *********************986 PP
2	FAR1	53.2	9.7e-17	249	337	2	77
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwe 77 fYn+YA+++GF vrk+k+++s+ +g+ r+f+Cskeg+r+++ ++ + + r ++tr+gC+a+l+vkk +dg+ + OVA12623.1 249 FYNAYARTLGFIVRKDKTRRSNIDGSLLFRRFCCSKEGYRRKNCENdnndrkqviggvvVKVRARILPVTRVGCNARLEVKKGTDGEAH 337 9**************************************999888899999999987667777889************9977655 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MDMESTSQFD SLETDSEIFA AVAQADCGDK VVSPPETVDN THTHNEGTCT KPFVGMEFET 60 LHKAFLFYNE YAAIVGFSVR KDKTRKSNID GSYLFRRFCC SKEGYPRKTL ENNNNTNGKP 120 MQVKDGLVVK MESRIQPVLR VGRRAKLDMK RRAEVQQRMR VGCNARLDVK RTTDGKWVIQ 180 KFVEEHNHEC VSLDETHLLR SHRSRRAARG LIDKHGVDEL PSSEERNLNE VPKPSVGMEF 240 ESPHKAYLFY NAYARTLGFI VRKDKTRRSN IDGSLLFRRF CCSKEGYRRK NCENDNNDRK 300 QVIGGVVVKV RARILPVTRV GCNARLEVKK GTDGEAHLLR THKLVESTQE QLTDSMTDAS 360 TRPKKGTSEA GESEKVGSEQ

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MDMESTSQFD SLETDSEIFA AVAQADCGDK VVSPPETVDN THTHNEGTCT KPFVGMEFET  60
LHKAFLFYNE YAAIVGFSVR KDKTRKSNID GSYLFRRFCC SKEGYPRKTL ENNNNTNGKP  120
MQVKDGLVVK MESRIQPVLR VGRRAKLDMK RRAEVQQRMR VGCNARLDVK RTTDGKWVIQ  180
KFVEEHNHEC VSLDETHLLR SHRSRRAARG LIDKHGVDEL PSSEERNLNE VPKPSVGMEF  240
ESPHKAYLFY NAYARTLGFI VRKDKTRRSN IDGSLLFRRF CCSKEGYRRK NCENDNNDRK  300
QVIGGVVVKV RARILPVTRV GCNARLEVKK GTDGEAHLLR THKLVESTQE QLTDSMTDAS  360
TRPKKGTSEA GESEKVGSEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	2e-26	FAR1 family protein