PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12620.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 477aa    MW: 52011.9 Da    PI: 6.627
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.48.1e-06426448426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 ++C +f  +  Ck+G++C F H+
  OVA12620.1 426 KPCIYFNSSRGCKHGANCAFQHD 448
                 69********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MCVGILHTRY QDVLRVPSVI DIDIYWIGQV RLFLTEDSPS QVGLGAQDHL QAKTSWLLHS  60
TGAGSDDHLP PGFEGGAQSA NQLKKELSQI PLVKWQCPPR FFLNPHWQVV AGQESKEVET  120
QNQREMRVLE AVYPRPSAIP PSPSIPLESE NPYDDRQTPL IPVTPIEDED APDSSFNSVV  180
APINNPFLSQ LPVPPQSLLA PGILQTSQCN VSVSPNIPTN EKSGVGLVPG VEPDVVAAAS  240
AAFTAIMRSN EQGSLIDHEL LIKILSSPKL IEKLVTDYGT TPANANPQTT APKPPMNLSA  300
PQSGPLPVHI NRIAPETSAS TLPMNGHFYP VTNAVTTLLH PRPPPPPPPP GGIVQMSTTP  360
TVKAPPPVKD INYYKSLIQQ HGGERPENED PTPPQFSNHQ QHLGANQEQP LQSSKQRGEP  420
KPKIMKPCIY FNSSRGCKHG ANCAFQHDSS FQQRMGSIPE SQSTKRMKLD REITGRT