PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12253.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 543aa MW: 59757.5 Da PI: 6.5515

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	32.2	2.7e-10	170	226	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+ ++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g OVA12253.1 170 SIYRGVTKHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDREEKAARAYDLAALKYWG 226 57*****************5444.2455536655.779999************98 PP
2	AP2	47.1	5.9e-15	271	320	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g OVA12253.1 271 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 320 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MGSMNNNWLS FPLSPVHSSL SAHLHSSQTN QFSLGLVSDT MDHSFQNPDW NLISSHGGGI 60 GNEVPKVADF LGVEKSDNQT DLSAFNQIPA THESDYLLSN CTPQVAEISP SDDSSKDYES 120 QGNVGNLQSL TLSMGTGKGT SSNNVEVSVA NNAVEETPRR AIDTFGQRTS IYRGVTKHRW 180 TGRYEAHLWD NSCRREGQSR KGRQGGYDRE EKAARAYDLA ALKYWGTSTT TNFPISIYEK 240 ELEEMKHMTR QEFVASLRRK SSGFSRGASM YRGVTRHHQH GRWQARIGRV AGNKDLYLGT 300 FSTEEEAAEA YDIAAIKFRG LNAVTNFDMN RYDVKSILES NTLPIGGASK RLKETQDTET 360 LRKREEIKAI GSSFYDGNSS GFQGYPMVPP FEQTQPLLAL QNQQNYHYTQ DPHIHQNYMN 420 HQLHQNPSST ILHSSQGSQF HQGFFQNQPT MLHGLMTMGS SSSLMGSNGS SSNSYDEAAY 480 FGNGIALAAN PSAGNAGGIG SMTDLGLVKV DYDINSGSYG GWPAESVHGN GANPGSFTMW 540 NDN

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MGSMNNNWLS FPLSPVHSSL SAHLHSSQTN QFSLGLVSDT MDHSFQNPDW NLISSHGGGI  60
GNEVPKVADF LGVEKSDNQT DLSAFNQIPA THESDYLLSN CTPQVAEISP SDDSSKDYES  120
QGNVGNLQSL TLSMGTGKGT SSNNVEVSVA NNAVEETPRR AIDTFGQRTS IYRGVTKHRW  180
TGRYEAHLWD NSCRREGQSR KGRQGGYDRE EKAARAYDLA ALKYWGTSTT TNFPISIYEK  240
ELEEMKHMTR QEFVASLRRK SSGFSRGASM YRGVTRHHQH GRWQARIGRV AGNKDLYLGT  300
FSTEEEAAEA YDIAAIKFRG LNAVTNFDMN RYDVKSILES NTLPIGGASK RLKETQDTET  360
LRKREEIKAI GSSFYDGNSS GFQGYPMVPP FEQTQPLLAL QNQQNYHYTQ DPHIHQNYMN  420
HQLHQNPSST ILHSSQGSQF HQGFFQNQPT MLHGLMTMGS SSSLMGSNGS SSNSYDEAAY  480
FGNGIALAAN PSAGNAGGIG SMTDLGLVKV DYDINSGSYG GWPAESVHGN GANPGSFTMW  540
NDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20840.1	1e-166	AP2 family protein