PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12175.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARR-B

Protein Properties

Length: 661aa MW: 71868.8 Da PI: 6.1112

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.5	2.9e-28	223	276	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl OVA12175.1 223 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 276 79*****************.******************************8 PP
2	Myb_DNA-binding	40.2	7.6e-13	225	275	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ OVA12175.1 225 RVVWSVELHQQFVSAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 275 678**********************************************97 PP
3	Response_reg	75.8	1.6e-25	38	146	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+q+l+k y v+++ +++ al+ll+e++ +D+++ D+ mp+mdG++ll+ e++lp+i+++a g + + + +k Ga OVA12175.1 38 VLVVDDDTTCLRILEQMLRKCMY-LVTTCCQATVALNLLRERKgyFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMMSADGRTSAVMRGIKHGAC 132 89*******************.***********999999***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ eel + OVA12175.1 133 DYLIKPVRLEELKN 146 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MATVHKLQVS SLSTTASSYG SSKADGAVSD QFPVGMRVLV VDDDTTCLRI LEQMLRKCMY 60 LVTTCCQATV ALNLLRERKG YFDVVISDVH MPDMDGFKLL ELVGLEMDLP VIMMSADGRT 120 SAVMRGIKHG ACDYLIKPVR LEELKNIWQH VVRKKWSGSK EPEQSGSMEE NDRHKQGGDD 180 AEYASSANEG TDGSWKVQKK RKDTKDEEDD GELENDDPSA AKKPRVVWSV ELHQQFVSAV 240 NQLGIDKAVP KRILELMNVP GLTRENVASH LQKFRLYLKR LSGVAQQQAG VPTPFYGSVD 300 SNPKLGSLGR LDIQALAASG QIPPQTLAAL HAEVLGRPTG TLVLPSMDKP VLFQTSLQSA 360 KSIPSERQVA FGQPIVKCQS NISKHFPQSH LSVEDFPSGF GSWPSNNLST VSSLGSLGNL 420 NTQNGNMLMQ IFQQQQQQQS VVSETSHGIN VQPSCLVVPS QSPANFQAVN TSVSLNQNNT 480 FSSTPVIDYG LLPSQSNSVS VGLSQVPDVD FKNSDVLNGY SIPVSLSPSV SSFSATQADN 540 STSWQVQNSA INFSTASKLP GLVPNMCEFQ GSYSPRAGDL SNQGRSRNLG FVGKGTSIPS 600 RFAVDDFESS LDELSYLKTS GDNNGDRVKQ ESNLDFTENA RVGIPVLQHY SPNDLMSVLS 660 K

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MATVHKLQVS SLSTTASSYG SSKADGAVSD QFPVGMRVLV VDDDTTCLRI LEQMLRKCMY  60
LVTTCCQATV ALNLLRERKG YFDVVISDVH MPDMDGFKLL ELVGLEMDLP VIMMSADGRT  120
SAVMRGIKHG ACDYLIKPVR LEELKNIWQH VVRKKWSGSK EPEQSGSMEE NDRHKQGGDD  180
AEYASSANEG TDGSWKVQKK RKDTKDEEDD GELENDDPSA AKKPRVVWSV ELHQQFVSAV  240
NQLGIDKAVP KRILELMNVP GLTRENVASH LQKFRLYLKR LSGVAQQQAG VPTPFYGSVD  300
SNPKLGSLGR LDIQALAASG QIPPQTLAAL HAEVLGRPTG TLVLPSMDKP VLFQTSLQSA  360
KSIPSERQVA FGQPIVKCQS NISKHFPQSH LSVEDFPSGF GSWPSNNLST VSSLGSLGNL  420
NTQNGNMLMQ IFQQQQQQQS VVSETSHGIN VQPSCLVVPS QSPANFQAVN TSVSLNQNNT  480
FSSTPVIDYG LLPSQSNSVS VGLSQVPDVD FKNSDVLNGY SIPVSLSPSV SSFSATQADN  540
STSWQVQNSA INFSTASKLP GLVPNMCEFQ GSYSPRAGDL SNQGRSRNLG FVGKGTSIPS  600
RFAVDDFESS LDELSYLKTS GDNNGDRVKQ ESNLDFTENA RVGIPVLQHY SPNDLMSVLS  660
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-118	ARR-B family protein