PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12152.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 820aa MW: 93203 Da PI: 5.5096

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	96.8	2.5e-30	87	182	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+r+e++ + + k+rr r+ tr gCka ++v++++ gkw+v+kle++HnHel+ OVA12152.1 87 NFYNAYAKQMGFSIRVNSYYRSKKDNSIISREFCCSKEGFRREKRARkidssdDAKRRRARPITREGCKALMTVRRRDCGKWYVAKLEKNHNHELV 182 6****************************************9998899999999999***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 820 aa Download sequence
MEGGQIEQSN MEETVSLGKD MMDSMEYVAL EDEGEECCVV EDVEVPMVFD DAKKEDSMNL 60 DLSACLAGGI TEPAMDMEFA SEDDARNFYN AYAKQMGFSI RVNSYYRSKK DNSIISREFC 120 CSKEGFRREK RARKIDSSDD AKRRRARPIT REGCKALMTV RRRDCGKWYV AKLEKNHNHE 180 LVTPAMRHFL RSHRQEYDPH KTLVSNYGSP GMSTNSTVNL FTEECGGISK VGFPTEDQSN 240 FIGKGRLSTF GLDAQSLLSF FKIMQANDPA FFYAIQVDEE DRLSSVFWVD TRSRISYNCF 300 SDVVAFDTTY QVNQYKMPFA PFTGVNHHKQ SVLFGCALLA DETESTFVWL FKTWLEAMSG 360 RLPGLIITDH DMTIKNAVAR VFPESCHRYC KWHILSKMPK ELGHVYSALP KTFQMEFDKC 420 INKSETIEEF ELAWDSLLDR YNLRGNEWLQ SLYIDCKEWV PAYLRDIFFA GMSSTQRSGS 480 VNSLFDGYVN ARTTLEDFAE QYEKALDDRF EKEARAEFDT FYTKPVLKTP LPIEKQAADV 540 YTRKMFTALQ DEIFESLVLA VKKSVEDGAT STYEVARFDE EHKVYFVACN DSEQVASCSC 600 KMFESEGILC RHVLAVFKAT NVFTLPSHYI LKRWTRNAKD EAVLDLLPSV ESQANSHKAK 660 NLQYNILYQE AIKCAEEGVA SDHSFKVALT ALREARNKIV DAKKNASNAP KVESGVSGSC 720 QDGNSFLGCQ VDSSTYPIIS HDLQNNKTKD SPTSNNKYKF VSEQHSSRIR TCTKCKCPGH 780 DSRTCLWLKD PDSNTVVGQT DQELESMASQ CGVQDNIPQS

Sequence ? help Back to Top

Protein Sequence Length: 820 aa Download sequence

MEGGQIEQSN MEETVSLGKD MMDSMEYVAL EDEGEECCVV EDVEVPMVFD DAKKEDSMNL  60
DLSACLAGGI TEPAMDMEFA SEDDARNFYN AYAKQMGFSI RVNSYYRSKK DNSIISREFC  120
CSKEGFRREK RARKIDSSDD AKRRRARPIT REGCKALMTV RRRDCGKWYV AKLEKNHNHE  180
LVTPAMRHFL RSHRQEYDPH KTLVSNYGSP GMSTNSTVNL FTEECGGISK VGFPTEDQSN  240
FIGKGRLSTF GLDAQSLLSF FKIMQANDPA FFYAIQVDEE DRLSSVFWVD TRSRISYNCF  300
SDVVAFDTTY QVNQYKMPFA PFTGVNHHKQ SVLFGCALLA DETESTFVWL FKTWLEAMSG  360
RLPGLIITDH DMTIKNAVAR VFPESCHRYC KWHILSKMPK ELGHVYSALP KTFQMEFDKC  420
INKSETIEEF ELAWDSLLDR YNLRGNEWLQ SLYIDCKEWV PAYLRDIFFA GMSSTQRSGS  480
VNSLFDGYVN ARTTLEDFAE QYEKALDDRF EKEARAEFDT FYTKPVLKTP LPIEKQAADV  540
YTRKMFTALQ DEIFESLVLA VKKSVEDGAT STYEVARFDE EHKVYFVACN DSEQVASCSC  600
KMFESEGILC RHVLAVFKAT NVFTLPSHYI LKRWTRNAKD EAVLDLLPSV ESQANSHKAK  660
NLQYNILYQE AIKCAEEGVA SDHSFKVALT ALREARNKIV DAKKNASNAP KVESGVSGSC  720
QDGNSFLGCQ VDSSTYPIIS HDLQNNKTKD SPTSNNKYKF VSEQHSSRIR TCTKCKCPGH  780
DSRTCLWLKD PDSNTVVGQT DQELESMASQ CGVQDNIPQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein