PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12061.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GeBP

Protein Properties

Length: 350aa MW: 40715.3 Da PI: 4.5133

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	105.3	4.6e-33	143	242	3	97
DUF573 3 fqrlwseeDeivlLqGlidf...kaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96 fqr+wse+Deiv+L G++d+ k+k+g +p dd+daf ef+kks++++ v++sql eKirrLK+Kf+++ +k ++ g++ +f k+hd+k++e+sk+iW OVA12061.1 143 FQRVWSEHDEIVILEGMVDYmkkKKKKGLKPNDDMDAFLEFIKKSLQVDhVKTSQLREKIRRLKEKFQNNARKeKELGEKLKFLKPHDSKSYEISKMIW 241 9*****************544445566**************9747889***********999956779******************* PP DUF573 97 g 97 OVA12061.1 242 T 242 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MTLKRRSNPP AASSSSEEVV DKIEDAKHEQ PEEEEESEKE EEEEEEESEK EEEEEESEKE 60 EKVEEEEEEE EEEESEKKVE ENEEEVEKEE TEEKEEEVQK EKETTNVIKP TNSTVTPSKR 120 CPTVEKLTMM EKRRKKNNDR LPFQRVWSEH DEIVILEGMV DYMKKKKKKG LKPNDDMDAF 180 LEFIKKSLQV DHVKTSQLRE KIRRLKEKFQ NNARKEKELG EKLKFLKPHD SKSYEISKMI 240 WTPINVKALE ASNNGGGKSS NRKSKAKQPD MHEPGKEDDL GWSILPSTLG GFLGNEEWLL 300 ELIGTSKAKE LEQKWKLQII DETKAYLNMV ELAREGAKAV LDGLESTSNS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MTLKRRSNPP AASSSSEEVV DKIEDAKHEQ PEEEEESEKE EEEEEEESEK EEEEEESEKE  60
EKVEEEEEEE EEEESEKKVE ENEEEVEKEE TEEKEEEVQK EKETTNVIKP TNSTVTPSKR  120
CPTVEKLTMM EKRRKKNNDR LPFQRVWSEH DEIVILEGMV DYMKKKKKKG LKPNDDMDAF  180
LEFIKKSLQV DHVKTSQLRE KIRRLKEKFQ NNARKEKELG EKLKFLKPHD SKSYEISKMI  240
WTPINVKALE ASNNGGGKSS NRKSKAKQPD MHEPGKEDDL GWSILPSTLG GFLGNEEWLL  300
ELIGTSKAKE LEQKWKLQII DETKAYLNMV ELAREGAKAV LDGLESTSNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	172	KRRKKNNDRLPFQRVWSEHDEIVILEGMVDYMKKKKKKGLK
2	133	173	KRRKKNNDRLPFQRVWSEHDEIVILEGMVDYMKKKKKKGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	4e-20	GeBP family protein