PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11900.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family bHLH
Protein Properties Length: 350aa    MW: 39236.3 Da    PI: 5.5682
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.3e-10263306755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ ++RR+ri +++  L++l+P+       K++ +++LekA+ Y+k Lq
  OVA11900.1 263 IAAKNRRERISERLKILQDLVPNG-----SKVDLVTMLEKAISYVKFLQ 306
                 5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MALAKERTGP ESSSHMNLIH VYGNMYGGNS SSVQVSDPSS VELFGFENYT KMVIDEEGDG  60
SSEEKMCRLP SLTEPTSNVM FNDEEMNSSS SQEDQSHEYV INFKPGFDHW IHSSGSLLSF  120
GERVPGTHNR YQRIQHEDDE YPNWEGVMDD HQNYHQWNHP KSSSGLIETR LSDDLNSFET  180
ASSTYGSMNK TTKDNQHGEE RFGWLYSGGG TDENLQEAGC SETNFLKRPH LDGEMQPTKK  240
HCSGAPRKPK SKSPVPAKDP QSIAAKNRRE RISERLKILQ DLVPNGSKVD LVTMLEKAIS  300
YVKFLQLQVK VLATDEFWPA QGGKAPEVSQ VKEAIDAILS SHKDRNSSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.17e-60bHLH family protein