PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11415.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 877aa MW: 98933.5 Da PI: 7.1483

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	116.9	1.1e-36	200	277	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv+gCe+d+se+k yhrrh+vC +++a++v+++g+ +r+CqqC++fh l +fDe+krsCrr+L++hn+rrr+k++ OVA11415.1 200 RCQVPGCEVDISELKGYHRRHRVCLRCANATSVVLDGQPKRYCQQCGKFHILPDFDEGKRSCRRKLERHNKRRRRKST 277 6*************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 877 aa Download sequence
MLLEISSTSR LIRVATYQAP PVVDSRWFCL SLAWRPFSAN FSPSNSKNVS NFLGFPFTSL 60 KMQIPPPQPP PQSPEPPHSV RVRVSEMEET PQILDEPSTS WEWNSLLDFN LDDQLNISWS 120 PEYQTIDPSP NPSSEVVTEH SNRGSDGSDS RIRKRDPRLT CENFLAGIIP CACPEVDEKL 180 EEEEGGSGKK RARTVSVAAR CQVPGCEVDI SELKGYHRRH RVCLRCANAT SVVLDGQPKR 240 YCQQCGKFHI LPDFDEGKRS CRRKLERHNK RRRRKSTDPR GIAEKETQGD MPTEDLACDV 300 EAGKDNLSLS SHRVDEPVVE SEDGHASPLS SLPSSQDIRS DSVISFAASG EPQKEQAKDN 360 SMFTLSSSFC DNKSAYSSVC PTGRISFKLY DWNPAEFPRR LRHQIFQWLA SMPVELEGYI 420 RPGCTILTVF IAMPRFMWEK VSEDAASYVH EFVSAPECML FGRGTITVYL NDMIFRVMKG 480 GTSLTNVKVE MQAPRLHYVH PTCFEAGKPM EFVACGSNLL QPKFRFLISF AGRYLPYNYR 540 FAISHGKTAS CHGNEVNSAQ CCDHQIYKIY IPKTEPKLFG PAFIEVESEF GLSNFIPILF 600 GDRQTCSEMQ MVQEKLDGSL YSTRAHFGVL DAISGSCKFF ESRQKAMSEL ILDIAWLLKQ 660 PKSEDDKLLS SSKIQRLNCL LSFLVQNDSI VLLGKILQSL ENVMDAQKPF NPANKINDAD 720 MSLFQKYIVH AREIVHQRNQ HTREIIQRPR SRFSEGDCFS QIHSENDRLY VVPSNNEDME 780 MAMEKRLGSI TNSAFQERSE TIPLLNGEVT TDVTHQQWPK KSCGRIFSST ILSPRPLVLI 840 VAVAALCSGV CAVVFHPHKV GEFAVSIRRC LFGYSNS

Sequence ? help Back to Top

Protein Sequence Length: 877 aa Download sequence

MLLEISSTSR LIRVATYQAP PVVDSRWFCL SLAWRPFSAN FSPSNSKNVS NFLGFPFTSL  60
KMQIPPPQPP PQSPEPPHSV RVRVSEMEET PQILDEPSTS WEWNSLLDFN LDDQLNISWS  120
PEYQTIDPSP NPSSEVVTEH SNRGSDGSDS RIRKRDPRLT CENFLAGIIP CACPEVDEKL  180
EEEEGGSGKK RARTVSVAAR CQVPGCEVDI SELKGYHRRH RVCLRCANAT SVVLDGQPKR  240
YCQQCGKFHI LPDFDEGKRS CRRKLERHNK RRRRKSTDPR GIAEKETQGD MPTEDLACDV  300
EAGKDNLSLS SHRVDEPVVE SEDGHASPLS SLPSSQDIRS DSVISFAASG EPQKEQAKDN  360
SMFTLSSSFC DNKSAYSSVC PTGRISFKLY DWNPAEFPRR LRHQIFQWLA SMPVELEGYI  420
RPGCTILTVF IAMPRFMWEK VSEDAASYVH EFVSAPECML FGRGTITVYL NDMIFRVMKG  480
GTSLTNVKVE MQAPRLHYVH PTCFEAGKPM EFVACGSNLL QPKFRFLISF AGRYLPYNYR  540
FAISHGKTAS CHGNEVNSAQ CCDHQIYKIY IPKTEPKLFG PAFIEVESEF GLSNFIPILF  600
GDRQTCSEMQ MVQEKLDGSL YSTRAHFGVL DAISGSCKFF ESRQKAMSEL ILDIAWLLKQ  660
PKSEDDKLLS SSKIQRLNCL LSFLVQNDSI VLLGKILQSL ENVMDAQKPF NPANKINDAD  720
MSLFQKYIVH AREIVHQRNQ HTREIIQRPR SRFSEGDCFS QIHSENDRLY VVPSNNEDME  780
MAMEKRLGSI TNSAFQERSE TIPLLNGEVT TDVTHQQWPK KSCGRIFSST ILSPRPLVLI  840
VAVAALCSGV CAVVFHPHKV GEFAVSIRRC LFGYSNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	262	274	RRKLERHNKRRRR
2	270	275	KRRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	0.0	SBP family protein