PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11367.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 455aa MW: 50562.4 Da PI: 6.1286

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.1	6.3e-08	368	408	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L OVA11367.1 368 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 408 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MDILGWDKPS AVTNASSSTV QPYLWSNQQH EIGENSMVSS NANHHYSIIG GKMNQVHEGF 60 FHLSPEFQGI KACEYNLNSN RVREMVQQLA PALDSTHNVA SNLNFMKPQE AKSSGAAGTS 120 TCGEVLCSSP LINRPNYIMN PFTGSMEGAF STAKVSSLME SLDCLMSAAK NCNTETSVDD 180 ESIETMMFPD CRNLWDFGAV SSSGESQNNR SNEENKESNW QVNEPDHETL SQGSSINLCV 240 NNGGSSDTRS NNFSKKRERE KIKENTNCSN IDLVQSDCFT TEAGFRLITE NPPKLKRSRL 300 EKSSNISFQN PDSSVSLVDE PDTEAIAQMK EMIYRAAAFR PVNLGLEVVE KPKRKNVRIS 360 SDPQTVAARQ RRERISERIR VLQRLVPGGS KMDTASMLDE AANYLKFLKS QVKALETLGQ 420 KFDSVNSTTI NLPFSSSPQF NHNFAMQTLF QFPKP

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MDILGWDKPS AVTNASSSTV QPYLWSNQQH EIGENSMVSS NANHHYSIIG GKMNQVHEGF  60
FHLSPEFQGI KACEYNLNSN RVREMVQQLA PALDSTHNVA SNLNFMKPQE AKSSGAAGTS  120
TCGEVLCSSP LINRPNYIMN PFTGSMEGAF STAKVSSLME SLDCLMSAAK NCNTETSVDD  180
ESIETMMFPD CRNLWDFGAV SSSGESQNNR SNEENKESNW QVNEPDHETL SQGSSINLCV  240
NNGGSSDTRS NNFSKKRERE KIKENTNCSN IDLVQSDCFT TEAGFRLITE NPPKLKRSRL  300
EKSSNISFQN PDSSVSLVDE PDTEAIAQMK EMIYRAAAFR PVNLGLEVVE KPKRKNVRIS  360
SDPQTVAARQ RRERISERIR VLQRLVPGGS KMDTASMLDE AANYLKFLKS QVKALETLGQ  420
KFDSVNSTTI NLPFSSSPQF NHNFAMQTLF QFPKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	369	374	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	2e-64	bHLH family protein