PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11351.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HRT-like

Protein Properties

Length: 474aa MW: 53256.8 Da PI: 10.4694

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	59.4	5.8e-19	289	319	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l+dGsvCkr+P++gRKRCeeHKG+Ri OVA11351.1 289 ICGVSLGDGSVCKRKPIQGRKRCEEHKGKRI 319 8*****************************7 PP
2	HRT-like	59	7.8e-19	334	364	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CGv+l+dGsvC + Pv+gRKRCe HKGmRi OVA11351.1 334 VCGVNLGDGSVCLEVPVHGRKRCELHKGMRI 364 7*****************************7 PP
3	HRT-like	55.8	7.8e-18	397	427	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CGv l+dGsvCk+ P++gRKRC eHKG+R+ OVA11351.1 397 VCGVFLSDGSVCKNRPIEGRKRCGEHKGQRV 427 7*****************************7 PP
4	HRT-like	52.7	7.3e-17	442	472	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l++GsvC++ Pv+gRKRCe HKG+R+ OVA11351.1 442 ICGVGLGNGSVCMKVPVHGRKRCELHKGRRV 472 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MGASEFSSST RLKREASTAA PATGQWIPSV RVFKTDQWRR GALPILIGHS DWENYFLGKE 60 GIDRYRIHNL PLKCSCPGLY ELGIASSRTN LGRDVRKLDQ DRIIVVYLGQ ADNVRTRLQH 120 YGRAGSHLDH GRSFGHLNAD NSLVSLRGPG LFREIFSRGF PLVFRWAPME NKKEAEKTEA 180 QLLGIFDYAW NNVGNGVRRP NDILLKLDKI TSSTNQFPSI TRKLQQWLLE QPFVGKESGI 240 RIKASSPTKS DTSSDRVNYD FRSRIFKFGR TQPRLISEKC GVKEENAIIC GVSLGDGSVC 300 KRKPIQGRKR CEEHKGKRIN GFISRPVNED ISVVCGVNLG DGSVCLEVPV HGRKRCELHK 360 GMRISTSNIF PDKERRVSSS NTFFPDRKSQ IEENTTVCGV FLSDGSVCKN RPIEGRKRCG 420 EHKGQRVNES IFRSKTEEKS VICGVGLGNG SVCMKVPVHG RKRCELHKGR RVSQ

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MGASEFSSST RLKREASTAA PATGQWIPSV RVFKTDQWRR GALPILIGHS DWENYFLGKE  60
GIDRYRIHNL PLKCSCPGLY ELGIASSRTN LGRDVRKLDQ DRIIVVYLGQ ADNVRTRLQH  120
YGRAGSHLDH GRSFGHLNAD NSLVSLRGPG LFREIFSRGF PLVFRWAPME NKKEAEKTEA  180
QLLGIFDYAW NNVGNGVRRP NDILLKLDKI TSSTNQFPSI TRKLQQWLLE QPFVGKESGI  240
RIKASSPTKS DTSSDRVNYD FRSRIFKFGR TQPRLISEKC GVKEENAIIC GVSLGDGSVC  300
KRKPIQGRKR CEEHKGKRIN GFISRPVNED ISVVCGVNLG DGSVCLEVPV HGRKRCELHK  360
GMRISTSNIF PDKERRVSSS NTFFPDRKSQ IEENTTVCGV FLSDGSVCKN RPIEGRKRCG  420
EHKGQRVNES IFRSKTEEKS VICGVGLGNG SVCMKVPVHG RKRCELHKGR RVSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-95	HRT-like family protein