PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11247.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 481aa MW: 53903 Da PI: 5.9745

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.5	6e-17	182	231	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OVA11247.1 182 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 231 78*****************......55**********************997 PP
2	AP2	45.9	1.4e-14	274	324	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k++g OVA11247.1 274 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDTEIEAARAYDKAAIKYNG 324 89******.7**5553..2.26******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MWDLNDSPDQ RREDESEGCS SHKTSGDGDY EKGKRVGSIS NENSSSSAVL FIEEGSDDFD 60 QEAGVGVDEG RERRKRTSSN STSSSKIFGF SMSTTHEEES EPASVVVTRE FFPVGESSEM 120 ETQVDGGTAP FPRAHWVGVR FQSEEASLVA AAAKKAAESS LAHQQPANIN KKSRRGPRSR 180 SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVEADINFSL 240 DDYEDDLKQM TNLTKEEFVH VLRRQSTGFP RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI 300 YLGLFDTEIE AARAYDKAAI KYNGKEAVTN FDPSVYETEL NSSGKDGNHN LDLSLGSSSS 360 SKNNNLESRD DNGSSANASP LIWFEPDWRN NNQGFRSMVP DEPSMISSTS NLSNREAGCD 420 DQRETLQMLN NTHIQTPISQ KINDHQMQRY DQQFKRNGET PMLQILQSSH FRPPIYQVGS 480 L

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MWDLNDSPDQ RREDESEGCS SHKTSGDGDY EKGKRVGSIS NENSSSSAVL FIEEGSDDFD  60
QEAGVGVDEG RERRKRTSSN STSSSKIFGF SMSTTHEEES EPASVVVTRE FFPVGESSEM  120
ETQVDGGTAP FPRAHWVGVR FQSEEASLVA AAAKKAAESS LAHQQPANIN KKSRRGPRSR  180
SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVEADINFSL  240
DDYEDDLKQM TNLTKEEFVH VLRRQSTGFP RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI  300
YLGLFDTEIE AARAYDKAAI KYNGKEAVTN FDPSVYETEL NSSGKDGNHN LDLSLGSSSS  360
SKNNNLESRD DNGSSANASP LIWFEPDWRN NNQGFRSMVP DEPSMISSTS NLSNREAGCD  420
DQRETLQMLN NTHIQTPISQ KINDHQMQRY DQQFKRNGET PMLQILQSSH FRPPIYQVGS  480
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-111	AP2 family protein