PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11222.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 463aa MW: 50751.1 Da PI: 9.2083

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4.1e-05	64	84	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H OVA11222.1 64 CEICGKGFQRDQNLQLHRRGH 84 *******************88 PP
2	zf-C2H2	12.9	0.00034	138	160	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ OVA11222.1 138 WKCDKCSKRYAVQSDWKAHSKTC 160 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MAAGEPIIMT NPFSSTQNPA DFVVGPINPP IIKKKRNLPG TPDPEAEVIA LSPKTLMATN 60 RFLCEICGKG FQRDQNLQLH RRGHNLPWKL RQRSSKEPKK RVYVCPEKSC VHHHPSRALG 120 DLTGIKKHFC RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTREYKCDCG TLFSRRDSFL 180 THRAFCDALA EETARVTAAS NINHSMASNI NYHFVGTSLG PNMVQHFSSI FKPIPSNGEE 240 SIDHNNTAGL SLWMGQGSQV SPISNTSSIR ELHQLGSANS GTLYGDPFGS CSNPQQSDFQ 300 LNWVLGSKLS STNSGELTSI KEVGSPQLVS APSLYSTQHH HHHHQQQPAA NMSATALLQK 360 AAQIGATSTN PSLLVSFGVK CNENQTQDVT KFSGFFGSNS TNINLGTHLE NPLIDLSTSN 420 QLQMYPAAKR RKLDDSEGGQ TRDFLGVGGV QTAICPSSIN GWT

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MAAGEPIIMT NPFSSTQNPA DFVVGPINPP IIKKKRNLPG TPDPEAEVIA LSPKTLMATN  60
RFLCEICGKG FQRDQNLQLH RRGHNLPWKL RQRSSKEPKK RVYVCPEKSC VHHHPSRALG  120
DLTGIKKHFC RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTREYKCDCG TLFSRRDSFL  180
THRAFCDALA EETARVTAAS NINHSMASNI NYHFVGTSLG PNMVQHFSSI FKPIPSNGEE  240
SIDHNNTAGL SLWMGQGSQV SPISNTSSIR ELHQLGSANS GTLYGDPFGS CSNPQQSDFQ  300
LNWVLGSKLS STNSGELTSI KEVGSPQLVS APSLYSTQHH HHHHQQQPAA NMSATALLQK  360
AAQIGATSTN PSLLVSFGVK CNENQTQDVT KFSGFFGSNS TNINLGTHLE NPLIDLSTSN  420
QLQMYPAAKR RKLDDSEGGQ TRDFLGVGGV QTAICPSSIN GWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-146	C2H2 family protein