PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11164.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 465aa    MW: 52837.9 Da    PI: 9.2231
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.51.8e-06831126
                --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                +kt+lC+ ++r G+C++  +C+FaHg
  OVA11164.1  8 FKTKLCMLYQR-GHCSR-QTCSFAHG 31
                69*********.*****.*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MMMERKLFKT KLCMLYQRGH CSRQTCSFAH GDAELRRFSG SSFNGRQEDK GSDLRDKLDR  60
RHSPQRRYSP GRDARGRNAF HGQKQLRFDR GYSASRSPGK RSERKHRKKQ HLDGQSDVSG  120
SLKISDGAEG VKERPHGANN DLLEEQLRQV QLDIDKLDNQ KRQLEIYMEE RIQEADSLAS  180
RNEELEAQLS KEQEHFKRIT SKIKKFIKAH SHYSRAQEEL KRSQARLQKL GEQIASDASK  240
PSANEEDSSV NIVSDGEPNY DNALSLRNEL QNHASPSKKR QRFSLGVSEE AKPANSKKFL  300
VETITLEKCT RWDGPSTQSE NKCKEADAVN KIMLRRNGHR SLAVENKNKW RKNGPSSISS  360
VEKAKGLEAG HMLPSTSMAA HAVDESVEVM EMEEKIEVVG ATTNVFHKGA SQENARLPHL  420
PPPPPPPRRD VYSQYKGKDE DVDVVELDGR AREADFDNEV EVDID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.11e-56C3H family protein