PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11125.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HD-ZIP
Protein Properties Length: 729aa    MW: 80024.8 Da    PI: 6.2797
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2063118156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  OVA11125.1  63 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 118
                 688999***********************************************999 PP
2START214.43.9e-672514711206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela +a++el++++ ++ep+Wv  +    e++ +de++++f+++ +      ++ea+r s+ v+m++ +lve+l+d++ qW+  +     ka+t+ev+s
  OVA11125.1 251 ELAVAAMEELIRMVHLGEPLWVPGPdgasEILSEDEYMRTFPRGIGpkpfgLKTEASRQSADVIMNHINLVEILMDVN-QWSSVFSsivsKAMTVEVLS 348
                 57899**************************************999********************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 +g      galq+m+ae+q++splvp R+ +fvRy++q+++g+w++vdvS+d+  + +    v R++++pSg+li++++ng+skv+wvehv++++r +h
  OVA11125.1 349 TGvagnfnGALQVMTAEFQVPSPLVPtRENLFVRYCKQHSDGTWAVVDVSLDHLHPSS----VSRCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRAVH 443
                 *****************************************************99855....8************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +++++lv+s la+gak+w+atl+rqce+
  OVA11125.1 444 NIYKPLVNSALAFGAKRWLATLDRQCER 471
                 **************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    
MFQSNMFGTH HHQHNPLDML THNLSENDMT RIRDDEFESK SGSENLEGGA SGEEQDPNQR  60
PRKKRYHRHT QHQIQEMEAF FKECPHPDDK QRKELSRELG LEPLQVKFWF QNKRTQMKTQ  120
HERHENTQLR LENEKLRAEN MRYKEALSNA SCPNCGGPTS LGEMSFDEHH LRIENARLRE  180
EIDRISSIAA KYVGGKPMAS YPLLPPIPSR SLDLGVGVQA GIGGEMFGGG SGELLRSIPG  240
HTEADKPLII ELAVAAMEEL IRMVHLGEPL WVPGPDGASE ILSEDEYMRT FPRGIGPKPF  300
GLKTEASRQS ADVIMNHINL VEILMDVNQW SSVFSSIVSK AMTVEVLSTG VAGNFNGALQ  360
VMTAEFQVPS PLVPTRENLF VRYCKQHSDG TWAVVDVSLD HLHPSSVSRC RRRPSGCLIQ  420
EMPNGYSKVI WVEHVEVDDR AVHNIYKPLV NSALAFGAKR WLATLDRQCE RLASVMASNV  480
SFADAVITTQ EGRKCMLKLA ERMVMSFCAG VSASTTHTWT TLSGSGAEDV RVMTRKSVDD  540
PGRPPGIVLN AATSFWLPIP PKRVFDFLRD ENSRNEWDIL SNGGAVQEMA HIANGRDPGN  600
CVSLLRVHSA NSSQSNMLIL QESCTNATGS FVIYAPVDVA AMNTVLSGGD PDYVALLPSG  660
FAILPDGPTV HGGGIGEVGS GGCLLTVAFQ ILVDSIPTAK LSLGSVATVN SLIACTADRI  720
KAAVTCDNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein