PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11003.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MIKC_MADS
Protein Properties Length: 284aa    MW: 31446.7 Da    PI: 6.145
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.62.5e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtf+kRrng+lKKA+ELSvLCdae+a+iifss+gklye++s
  OVA11003.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSSRGKLYEFCS 59
                79***********************************************96 PP
2K-box91.61.4e-30861711297
       K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                   + + +q++ kLk+++e Lq+++R+llG+dLe+Ls+keL qLe+qLe slk++Rs+K++++l++++elq ke++lqe+n+a+++k
  OVA11003.1  86 DVQDETYQDYLKLKSRVEVLQQNHRNLLGQDLEPLSVKELDQLENQLEVSLKQVRSTKTQFMLDHLSELQIKEQMLQEANTAMNRK 171
                 44567899************************************************************************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALIIFSS RGKLYEFCSS  60
SSMLKTLERY QSCTSSSSQS CIPAKDVQDE TYQDYLKLKS RVEVLQQNHR NLLGQDLEPL  120
SVKELDQLEN QLEVSLKQVR STKTQFMLDH LSELQIKEQM LQEANTAMNR KQLDENNNGE  180
IPLQLKWDAD EPKMISYNHD NAAAAASEGF FQPLQCNPTL QIGTPLISFS SDFSSLSLSL  240
SLLSLLMYIG GGGGGGEVVV VRQGWWRHGG CDGGGGDGGS CGGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.12e-84MIKC_MADS family protein