PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA10997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | YABBY | ||||||||
Protein Properties | Length: 190aa MW: 20884.4 Da PI: 9.5079 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 138.2 | 9.4e-43 | 3 | 149 | 3 | 163 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 s se++Cyv+CnfC+t+lav vP ++++vtv+CG+C l ++ + +q+++++ + ++ ++ + + k ++s+s s OVA10997.1 3 YLSHSEHLCYVRCNFCSTVLAVGVPCRRSVETVTVKCGYCNCLSFLSTRPLVQAQSSSLD--L--------QMSAFQQGFGIDYRKGGQSSASP-S--- 87 6789************************************88766555555555555443..2........33444556666555555544444.4... PP YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 s++++ ++p++p v++PPe++ r Psaynrf+keeiqrika+nPdi hr afs aaknWa + OVA10997.1 88 STSSQPKSPNAPYVVKPPERKHRLPSAYNRFMKEEIQRIKAANPDIPHRVAFSSAAKNWARY 149 5678889999999***********************************************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MEYLSHSEHL CYVRCNFCST VLAVGVPCRR SVETVTVKCG YCNCLSFLST RPLVQAQSSS 60 LDLQMSAFQQ GFGIDYRKGG QSSASPSSTS SQPKSPNAPY VVKPPERKHR LPSAYNRFMK 120 EEIQRIKAAN PDIPHRVAFS SAAKNWARYI PHPSTGSTTG STTGSTTDQS SNNERRNVCG 180 IENVADATRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 4e-56 | YABBY family protein |