PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA10707.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | TCP | ||||||||
Protein Properties | Length: 269aa MW: 28200.6 Da PI: 10.1978 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 124 | 1.6e-38 | 41 | 137 | 2 | 104 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskks 100 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ ++s s+ +s ss++a+ + + + OVA10707.1 41 TVKKPPAKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFS-TVSVSVRGS--SSSSASV---SASLD 133 689******************************************************************888.333333333..2222222...22333 PP TCP 101 qksa 104 qk++ OVA10707.1 134 QKPT 137 3333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
MSTTDGATNG ALMDPQRQQP QTNGALTDSQ RQQSQTNGAL TVKKPPAKDR HSKVDGRGRR 60 IRMPIVCAAR VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAN FSTVSVSVRG 120 SSSSSASVSA SLDQKPTAQM MGPTPFLLGK RLRTDGGDDV SSNDDSSVGP TAAAAAAGGF 180 WALPARPDFG QVWSFSAAPE MVVPMAMPMP LAMSSSQPLI SGRFVQQSVG EASAARVGNY 240 LPISQGHLNL LASLSGNPAN SVRREDEPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 1e-69 | TCP family protein |