PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA10576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 775aa MW: 84785.2 Da PI: 6.2152 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.8 | 5.1e-20 | 96 | 152 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+ qVk+WFqN+R+++k+ OVA10576.1 96 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMKN 152 688999************************************************995 PP | |||||||
2 | START | 218.9 | 1.7e-68 | 294 | 514 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 ela +a++el++ a+++ep+Wv+ e +n+de++++f+++ + +++ea+r+s+vv+m++ +lve+l+d++ qW+ +a +a+tlev+s OVA10576.1 294 ELAVAAMEELIRIAQLGEPMWVQRIgepiETLNEDEYIRTFPRGIGikpfgFKTEASRDSTVVIMNHINLVEILMDVN-QWSAVFAgivsRAATLEVLS 391 57899**************************************999********************************.******************** PP TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS START 87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178 +g galq+m+ae+q++splvp R+++fvRy++q+ +g+w++vdvS+d+ + p v R++++pSg+li++++ng+skv+wvehv++++r +h OVA10576.1 392 TGvagnynGALQVMSAEFQVPSPLVPtRESLFVRYCKQHADGTWAVVDVSLDHLRASP----VPRCRRRPSGCLIQEMQNGYSKVIWVEHVEVDDRAVH 486 ********************************************************98....7************************************ PP HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 179 wllrslvksglaegaktwvatlqrqcek 206 l++ lv+s+ a+gak+wvatl+rqce+ OVA10576.1 487 DLYKLLVNSTFAFGAKRWVATLDRQCER 514 **************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 775 aa Download sequence |
MPAGIMIPAR HVPPMMGRSG NVAEFGSSSG LTLGHQQTNM MEGHQHNPLE MMNQNTPESS 60 EMARIRDDEF DSKSGSDNLE GASGDDQDPT QHPRKKKRYH RHTQHQIQEM EAFFKECPHP 120 DDKQRKELGR ELGLEPLQVK FWFQNKRTQM KNQHERHENS QLRAENEKLR AENIRYKEAL 180 TTSSCPNCGG PTALGEMSFD EHQLRVENVR LREEIDKISG IAAKYVGKPM MPYPLSSPSI 240 PPPRSLELGV GHFGGMQTQS DIGGGGGEMF GPGDLLRTVS SAGSTDAEKP IIIELAVAAM 300 EELIRIAQLG EPMWVQRIGE PIETLNEDEY IRTFPRGIGI KPFGFKTEAS RDSTVVIMNH 360 INLVEILMDV NQWSAVFAGI VSRAATLEVL STGVAGNYNG ALQVMSAEFQ VPSPLVPTRE 420 SLFVRYCKQH ADGTWAVVDV SLDHLRASPV PRCRRRPSGC LIQEMQNGYS KVIWVEHVEV 480 DDRAVHDLYK LLVNSTFAFG AKRWVATLDR QCERIASLMA SNIPAGDIGV ITTPDGKKSM 540 LKLAERMVIS FCAGVGGSTA HTWTTLSGSG AEDVRVMTRK SIDDPGRPPG IVLSAATSFW 600 IPVPPKRVFD FLRDENSRNE WDILSNGGLV QEMAHIANGR DPGNCVSLLR VNSTNSSQSN 660 MLILQETCTD STGSTIIYAP VDIQSMNNVL SGGNPDYVAL LPSGFAILPD GPISHHGSGP 720 IEYGRGGGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIS CTVDRIKAAV TCENA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05230.4 | 0.0 | HD-ZIP family protein |