PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA10377.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 69aa MW: 7941.34 Da PI: 10.7049 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.6 | 3.9e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtf kRr g+lKKAeELSvLCdaeva+iifs tgkl+eyss OVA10377.1 9 KKIDNTTARQVTFWKRRRGLLKKAEELSVLCDAEVALIIFSATGKLFEYSS 59 78***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 69 aa Download sequence |
MAREKIQIKK IDNTTARQVT FWKRRRGLLK KAEELSVLCD AEVALIIFSA TGKLFEYSSS 60 RSLSHFPLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24540.1 | 5e-33 | MIKC_MADS family protein |